RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SLC14A2Q15849 920 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 RIOX2Q8IUF8 465 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 TEX2Q8IWB9 1127 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 LZTR1Q8N653 840 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 CHST14Q8NCH0 376 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 OR2W6PQ8NHA6 318 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 CRAMP1Q96RY5 1269 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 JAM3Q9BX67 310 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 TMX4Q9H1E5 349 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-214ENST00000572365 PDLIM7Q9NR12 457 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 IMPACTQ9P2X3 320 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 B4GALT6Q9UBX8 382 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 STAP2Q9UGK3 403 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 CBLCQ9ULV8 474 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 RRP7AQ9Y3A4 280 aaKnown RBP6.88□□□□□ -1.31
SF3B3-214ENST00000572365 RWDD3Q9Y3V2 267 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 RBBP6Q7Z6E9 1792 aaKnown RBP6.87□□□□□ -1.31
SF3B3-214ENST00000572365 SPTBN5Q9NRC6 3674 aaKnown RBP6.87□□□□□ -1.31
SF3B3-214ENST00000572365 ABCC4O15439 1325 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 ALG1L2C9J202 215 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 ZEB2O60315 1214 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 HPXP02790 462 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 FUCA1P04066 466 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 MYL6BP14649 208 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 DNM2P50570 870 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 MVKQ03426 396 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 KIAA2012Q0VF49 1180 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 SKOR2Q2VWA4 1001 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-214ENST00000572365 MROH9Q5TGP6 573 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 MORC1Q86VD1 984 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 DEFB123Q8N688 67 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 AGBL5Q8NDL9 886 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 ATL2Q8NHH9 583 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 PI4K2BQ8TCG2 481 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 KCNJ15Q99712 375 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 PLCD4Q9BRC7 762 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 EPB41L1Q9H4G0 881 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.87□□□□□ -1.31
SF3B3-214ENST00000572365 CABP5Q9NP86 173 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 HOMER2Q9NSB8 354 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 CATSPERZQ9NTU4 200 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 FBLN5Q9UBX5 448 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 ADAMTS6Q9UKP5 1117 aa6.87□□□□□ -1.31
SF3B3-214ENST00000572365 UBN2Q6ZU65 1347 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 ZNF561-AS1K7EIQ3 104 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 ADAMTS4O75173 837 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 EFEMP2O95967 443 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 MSL3P1P0C860 447 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 PDE6AP16499 860 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 SPIRE1Q08AE8 756 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 DCTN1Q14203 1278 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 CRY1Q16526 586 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 TTC1Q99614 292 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 MXD3Q9BW11 206 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 IFT22Q9H7X7 185 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 PANK3Q9H999 370 aa6.86□□□□□ -1.31
SF3B3-214ENST00000572365 MBNL3Q9NUK0 354 aaKnown RBP6.86□□□□□ -1.31
SF3B3-214ENST00000572365 SIPA1L3O60292 1781 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-214ENST00000572365 LAMB2P55268 1798 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 RTL9Q8NET4 1388 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 A0A1W2PQ27 194 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 A0A1W2PQ64 194 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 A0A1W2PQC6 194 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 A0A1W2PQD8 194 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 ZNF891A8MT65 544 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-214ENST00000572365 NEMP1O14524 444 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 GPR39O43194 453 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 ECE2O60344 883 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 DGKIO75912 1065 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 WNT11O96014 354 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 PDGFRBP09619 1106 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 GNAT1P11488 350 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 PRKCAP17252 672 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 STAT4Q14765 748 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 PLCL1Q15111 1095 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 GPR19Q15760 415 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 ARHGAP44Q17R89 818 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 PLEKHG6Q3KR16 790 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 SLC9C1Q4G0N8 1177 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 RNF219Q5W0B1 726 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-214ENST00000572365 OTOP3Q7RTS5 596 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 NECAB2Q7Z6G3 386 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 NLRX1Q86UT6 975 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 FERMT3Q86UX7 667 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 SP8Q8IXZ3 490 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 LILRA2Q8N149 483 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 NXPE1Q8N323 547 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 CISD2Q8N5K1 135 aaKnown RBP6.85□□□□□ -1.31
SF3B3-214ENST00000572365 SUPT20HQ8NEM7 779 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 NUP43Q8NFH3 380 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 WDR66Q8TBY9 1149 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.85□□□□□ -1.31
SF3B3-214ENST00000572365 DPF2Q92785 391 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 USP7Q93009 1102 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 THUMPD2Q9BTF0 503 aaKnown RBP6.85□□□□□ -1.31
SF3B3-214ENST00000572365 RTFDC1Q9BY42 306 aaPredicted RBP6.85□□□□□ -1.31
SF3B3-214ENST00000572365 NYXQ9GZU5 481 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 IRF2BPLQ9H1B7 796 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 POLLQ9UGP5 575 aa6.85□□□□□ -1.31
SF3B3-214ENST00000572365 COA3Q9Y2R0 106 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms