RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PLS3P13797 630 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 PFKFB1P16118 471 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 SCP2P22307 547 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 AXLP30530 894 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 EFNA5P52803 228 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 MBTD1Q05BQ5 628 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 GIT2Q14161 759 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 DSC3Q14574 896 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 PPP4R3CPQ6ZMV5 832 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 TMEM87AQ8NBN3 555 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 DEPTORQ8TB45 409 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 SPIRE2Q8WWL2 714 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 MRPS27Q92552 414 aaKnown RBP21.47■■□□□ 1.03
DDX55-207ENST00000540763 KCNN1Q92952 543 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 DHX58Q96C10 678 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 PRIMPOLQ96LW4 560 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 NTPCRQ9BSD7 190 aaKnown RBP21.47■■□□□ 1.03
DDX55-207ENST00000540763 PANK2Q9BZ23 570 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 MINDY3Q9H8M7 445 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 AGPAT5Q9NUQ2 364 aa21.47■■□□□ 1.03
DDX55-207ENST00000540763 RNF216Q9NWF9 866 aaPredicted RBP21.47■■□□□ 1.03
DDX55-207ENST00000540763 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.46■■□□□ 1.03
DDX55-207ENST00000540763 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.46■■□□□ 1.03
DDX55-207ENST00000540763 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.46■■□□□ 1.03
DDX55-207ENST00000540763 KRT18P05783 430 aaKnown RBP21.46■■□□□ 1.03
DDX55-207ENST00000540763 AMPD3Q01432 767 aa21.46■■□□□ 1.03
DDX55-207ENST00000540763 DHX8Q14562 1220 aaKnown RBP21.46■■□□□ 1.03
DDX55-207ENST00000540763 FAM187BQ17R55 369 aa21.46■■□□□ 1.03
DDX55-207ENST00000540763 CNNM4Q6P4Q7 775 aa21.46■■□□□ 1.03
DDX55-207ENST00000540763 CLEC17AQ6ZS10 378 aa21.46■■□□□ 1.03
DDX55-207ENST00000540763 CATSPER4Q7RTX7 472 aa21.46■■□□□ 1.03
DDX55-207ENST00000540763 LINC01599Q8WXQ3 324 aa21.46■■□□□ 1.03
DDX55-207ENST00000540763 DDX12PQ92771 950 aa21.46■■□□□ 1.03
DDX55-207ENST00000540763 TRAIPQ9BWF2 469 aa21.46■■□□□ 1.03
DDX55-207ENST00000540763 RGS18Q9NS28 235 aa21.46■■□□□ 1.03
DDX55-207ENST00000540763 PRMT7Q9NVM4 692 aaPredicted RBP21.46■■□□□ 1.03
DDX55-207ENST00000540763 DACT1Q9NYF0 836 aa21.46■■□□□ 1.03
DDX55-207ENST00000540763 A0A1B0GVL5 298 aa21.45■■□□□ 1.02
DDX55-207ENST00000540763 GOLGA6L4A6NEF3 574 aa21.45■■□□□ 1.02
DDX55-207ENST00000540763 H0YCG3 227 aa21.45■■□□□ 1.02
DDX55-207ENST00000540763 INO80B-WBP1J3KQ70 363 aa21.45■■□□□ 1.02
DDX55-207ENST00000540763 ENPP3O14638 875 aa21.45■■□□□ 1.02
DDX55-207ENST00000540763 TBCAO75347 108 aaKnown RBP21.45■■□□□ 1.02
DDX55-207ENST00000540763 ERLIN2O94905 339 aa21.45■■□□□ 1.02
DDX55-207ENST00000540763 ATP2A2P16615 1042 aaKnown RBP21.45■■□□□ 1.02
DDX55-207ENST00000540763 ZSCAN20P17040 1043 aaPredicted RBP21.45■■□□□ 1.02
DDX55-207ENST00000540763 NPTX2P47972 431 aa21.45■■□□□ 1.02
DDX55-207ENST00000540763 PEX3P56589 373 aa21.45■■□□□ 1.02
DDX55-207ENST00000540763 SMAD3P84022 425 aaKnown RBP21.45■■□□□ 1.02
DDX55-207ENST00000540763 CCDC113Q9H0I3 377 aa21.45■■□□□ 1.02
DDX55-207ENST00000540763 PARVGQ9HBI0 331 aa21.45■■□□□ 1.02
DDX55-207ENST00000540763 ARHGAP28Q9P2N2 729 aa21.45■■□□□ 1.02
DDX55-207ENST00000540763 DENND3A2RUS2 1198 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 MYMKA6NI61 221 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 MGEA5O60502 916 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 CSDE1O75534 798 aaKnown RBP21.44■■□□□ 1.02
DDX55-207ENST00000540763 FAM13AO94988 1023 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 SLFN14P0C7P3 912 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 ABCD1P33897 745 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 SYKP43405 635 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 SMTNP53814 917 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 DEFB103AP81534 67 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 RAD51AP2Q09MP3 1159 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 MAPK6Q16659 721 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 AMHR2Q16671 573 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.44■■□□□ 1.02
DDX55-207ENST00000540763 SLC24A5Q71RS6 500 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 CEP57L1Q8IYX8 460 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 FSIP1Q8NA03 581 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 DNAJC19Q96DA6 116 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 CCDC51Q96ER9 411 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 ADAM2Q99965 735 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 FZD8Q9H461 694 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 TMEM134Q9H6X4 195 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 SEL1LQ9UBV2 794 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 ADGRA3Q8IWK6 1321 aa21.44■■□□□ 1.02
DDX55-207ENST00000540763 NPHP3-ACAD11A0A0J9YXS1 232 aa21.43■■□□□ 1.02
DDX55-207ENST00000540763 C9IYK1 514 aa21.43■■□□□ 1.02
DDX55-207ENST00000540763 FGFR4P22455 802 aa21.43■■□□□ 1.02
DDX55-207ENST00000540763 NDUFA8P51970 172 aa21.43■■□□□ 1.02
DDX55-207ENST00000540763 NCKAP1LP55160 1127 aa21.43■■□□□ 1.02
DDX55-207ENST00000540763 NCBP1Q09161 790 aaKnown RBP21.43■■□□□ 1.02
DDX55-207ENST00000540763 FAM109BQ6ICB4 259 aaPredicted RBP21.43■■□□□ 1.02
DDX55-207ENST00000540763 RTN4RL1Q86UN2 441 aaPredicted RBP21.43■■□□□ 1.02
DDX55-207ENST00000540763 HERC6Q8IVU3 1022 aa21.43■■□□□ 1.02
DDX55-207ENST00000540763 TOP1MTQ969P6 601 aa21.43■■□□□ 1.02
DDX55-207ENST00000540763 ELAC1Q9H777 363 aaKnown RBP21.43■■□□□ 1.02
DDX55-207ENST00000540763 KMT5AQ9NQR1 393 aa21.43■■□□□ 1.02
DDX55-207ENST00000540763 PIN4Q9Y237 131 aaKnown RBP21.43■■□□□ 1.02
DDX55-207ENST00000540763 CNTNAP2Q9UHC6 1331 aa21.43■■□□□ 1.02
DDX55-207ENST00000540763 FRMD3A2A2Y4 597 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 CCDC169A6NNP5 214 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 ACTN4O43707 911 aaKnown RBP21.42■■□□□ 1.02
DDX55-207ENST00000540763 TSPAN1O60635 241 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 GJB5O95377 273 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 MYL1P05976 194 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 MAPTP10636 758 aaKnown RBP21.42■■□□□ 1.02
DDX55-207ENST00000540763 SKIP12755 728 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 GAP43P17677 238 aa21.42■■□□□ 1.02
DDX55-207ENST00000540763 SARSP49591 514 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms