RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 PNMA5Q96PV4 448 aa19.24■□□□□ 0.67
USP35-202ENST00000528910 C11orf84Q9BUA3 381 aaPredicted RBP19.24■□□□□ 0.67
USP35-202ENST00000528910 PLVAPQ9BX97 442 aa19.24■□□□□ 0.67
USP35-202ENST00000528910 TMEM117Q9H0C3 514 aa19.24■□□□□ 0.67
USP35-202ENST00000528910 NT5C3AQ9H0P0 336 aa19.24■□□□□ 0.67
USP35-202ENST00000528910 ZSCAN16Q9H4T2 348 aaPredicted RBP19.24■□□□□ 0.67
USP35-202ENST00000528910 FAM105AQ9NUU6 356 aa19.24■□□□□ 0.67
USP35-202ENST00000528910 UNC80Q8N2C7 3258 aa19.24■□□□□ 0.67
USP35-202ENST00000528910 E9PMD0 336 aa19.23■□□□□ 0.67
USP35-202ENST00000528910 TSPAN1O60635 241 aa19.23■□□□□ 0.67
USP35-202ENST00000528910 ZNF623O75123 536 aa19.23■□□□□ 0.67
USP35-202ENST00000528910 SKIP12755 728 aa19.23■□□□□ 0.67
USP35-202ENST00000528910 IBSPP21815 317 aaPredicted RBP19.23■□□□□ 0.67
USP35-202ENST00000528910 HOXA11P31270 313 aaPredicted RBP19.23■□□□□ 0.67
USP35-202ENST00000528910 AMHR2Q16671 573 aa19.23■□□□□ 0.67
USP35-202ENST00000528910 CLLU1OSQ5K130 101 aa19.23■□□□□ 0.67
USP35-202ENST00000528910 RSPH1Q8WYR4 309 aa19.23■□□□□ 0.67
USP35-202ENST00000528910 P2RX5Q93086 422 aa19.23■□□□□ 0.67
USP35-202ENST00000528910 CCDC51Q96ER9 411 aa19.23■□□□□ 0.67
USP35-202ENST00000528910 DNM3Q9UQ16 869 aa19.23■□□□□ 0.67
USP35-202ENST00000528910 CLIC4Q9Y696 253 aa19.23■□□□□ 0.67
USP35-202ENST00000528910 A0A0C4DFX4 3053 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 TBKBP1A7MCY6 615 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 ERLIN2O94905 339 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 PDIA4P13667 645 aaKnown RBP19.22■□□□□ 0.67
USP35-202ENST00000528910 AXLP30530 894 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 LONP1P36776 959 aaKnown RBP19.22■□□□□ 0.67
USP35-202ENST00000528910 GRIN1Q05586 938 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 GPM6BQ13491 265 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 UBXN11Q5T124 520 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 FAM173BQ6P4H8 233 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 MAEAQ7L5Y9 396 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 LRRC43Q8N309 656 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 CASD1Q96PB1 797 aa19.22■□□□□ 0.67
USP35-202ENST00000528910 TDRD15B5MCY1 1934 aaKnown RBP19.21■□□□□ 0.67
USP35-202ENST00000528910 LRRIQ4A6NIV6 560 aa19.21■□□□□ 0.67
USP35-202ENST00000528910 INO80B-WBP1J3KQ70 363 aa19.21■□□□□ 0.67
USP35-202ENST00000528910 NAMPTP43490 491 aa19.21■□□□□ 0.67
USP35-202ENST00000528910 PPP2R5AQ15172 486 aa19.21■□□□□ 0.67
USP35-202ENST00000528910 NAALADL2Q58DX5 795 aa19.21■□□□□ 0.67
USP35-202ENST00000528910 CABP7Q86V35 215 aa19.21■□□□□ 0.67
USP35-202ENST00000528910 KIFAP3Q92845 792 aa19.21■□□□□ 0.67
USP35-202ENST00000528910 MRPL38Q96DV4 380 aaKnown RBP19.21■□□□□ 0.67
USP35-202ENST00000528910 RUSC1Q9BVN2 902 aa19.21■□□□□ 0.67
USP35-202ENST00000528910 LMAN2LQ9H0V9 348 aa19.21■□□□□ 0.67
USP35-202ENST00000528910 REV3LO60673 3130 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 BRWD1Q9NSI6 2320 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 HSP90AA1P07900 732 aaKnown RBP19.2■□□□□ 0.66
USP35-202ENST00000528910 MAPK7Q13164 816 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 PTPROQ16827 1216 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 FAM187BQ17R55 369 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 NOTUMQ6P988 496 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.2■□□□□ 0.66
USP35-202ENST00000528910 ZBTB8OSQ8IWT0 167 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 ABI1Q8IZP0 508 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 PRIMPOLQ96LW4 560 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 USP28Q96RU2 1077 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 CCDC113Q9H0I3 377 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 C2orf40Q9H1Z8 148 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 CWH43Q9H720 699 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 HCSTQ9UBK5 93 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 FBXO2Q9UK22 296 aaPredicted RBP19.2■□□□□ 0.66
USP35-202ENST00000528910 PCDHB2Q9Y5E7 798 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 CNTNAP2Q9UHC6 1331 aa19.2■□□□□ 0.66
USP35-202ENST00000528910 ARF4P18085 180 aaPredicted RBP19.19■□□□□ 0.66
USP35-202ENST00000528910 LAG3P18627 525 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 GUCY2CP25092 1073 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 NASPP49321 788 aaPredicted RBP19.19■□□□□ 0.66
USP35-202ENST00000528910 TIGD5Q53EQ6 642 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 RINT1Q6NUQ1 792 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 LRRC55Q6ZSA7 311 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 C1orf186Q6ZWK4 172 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 MRPL10Q7Z7H8 261 aaKnown RBP19.19■□□□□ 0.66
USP35-202ENST00000528910 DAW1Q8N136 415 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 MICALL1Q8N3F8 863 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 SYT2Q8N9I0 419 aaPredicted RBP19.19■□□□□ 0.66
USP35-202ENST00000528910 RNF169Q8NCN4 708 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 CDK5RAP3Q96JB5 506 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 TIPINQ9BVW5 301 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 MRPL9Q9BYD2 267 aaKnown RBP19.19■□□□□ 0.66
USP35-202ENST00000528910 CCSER1Q9C0I3 900 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 FZD8Q9H461 694 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 TYW1Q9NV66 732 aaKnown RBP19.19■□□□□ 0.66
USP35-202ENST00000528910 PRMT7Q9NVM4 692 aaPredicted RBP19.19■□□□□ 0.66
USP35-202ENST00000528910 KCND2Q9NZV8 630 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 MYO7AQ13402 2215 aa19.19■□□□□ 0.66
USP35-202ENST00000528910 MEIS3P2A8K0S8 358 aa19.18■□□□□ 0.66
USP35-202ENST00000528910 GRM6O15303 877 aa19.18■□□□□ 0.66
USP35-202ENST00000528910 NCLP19338 710 aaKnown RBP19.18■□□□□ 0.66
USP35-202ENST00000528910 UBA7P41226 1012 aa19.18■□□□□ 0.66
USP35-202ENST00000528910 SLC12A3P55017 1021 aa19.18■□□□□ 0.66
USP35-202ENST00000528910 ZRSR1Q15695 479 aaKnown RBP19.18■□□□□ 0.66
USP35-202ENST00000528910 CCDC85BQ15834 202 aaPredicted RBP19.18■□□□□ 0.66
USP35-202ENST00000528910 CSPP1Q1MSJ5 1256 aa19.18■□□□□ 0.66
USP35-202ENST00000528910 COLGALT1Q8NBJ5 622 aa19.18■□□□□ 0.66
USP35-202ENST00000528910 CNNM3Q8NE01 707 aa19.18■□□□□ 0.66
USP35-202ENST00000528910 HELQQ8TDG4 1101 aa19.18■□□□□ 0.66
USP35-202ENST00000528910 LRRC15Q8TF66 581 aa19.18■□□□□ 0.66
USP35-202ENST00000528910 PPM1EQ8WY54 764 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms