RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ZHX3Q9H4I2 956 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 ZNF576Q9H609 170 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 ELAC1Q9H777 363 aaKnown RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 IFT122Q9HBG6 1241 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 GPRC5CQ9NQ84 441 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 KMT5AQ9NQR1 393 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 XPNPEP1Q9NQW7 623 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 RGS18Q9NS28 235 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 AGPAT5Q9NUQ2 364 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 PRMT7Q9NVM4 692 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 TMEM161AQ9NX61 479 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 LARSQ9P2J5 1176 aaKnown RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 ODF2LQ9ULJ1 636 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 RBM19Q9Y4C8 960 aaKnown RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 ADGRA3Q8IWK6 1321 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 CARNS1A5YM72 827 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 C9IYK1 514 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 N4BP3O15049 544 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 GTPBP6O43824 516 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 CSDE1O75534 798 aaKnown RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 EOMESO95936 686 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 PRKCBP05771 671 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 PLS3P13797 630 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 SLC12A3P55017 1021 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 PEX3P56589 373 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 HTRA4P83105 476 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 AMPD3Q01432 767 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 GRIN1Q05586 938 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 MBTD1Q05BQ5 628 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 RAD51AP2Q09MP3 1159 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 PRPF4BQ13523 1007 aaKnown RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 DSC3Q14574 896 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 PAN2Q504Q3 1202 aaKnown RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 SPECC1Q5M775 1068 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 CDCA2Q69YH5 1023 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 RINT1Q6NUQ1 792 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 GLB1LQ6UWU2 654 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 SV2BQ7L1I2 683 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 KCNK18Q7Z418 384 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 TMCO2Q7Z6W1 182 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 ECHDC2Q86YB7 292 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 IFNLR1Q8IU57 520 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 CMTR2Q8IYT2 770 aaKnown RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 CEP57L1Q8IYX8 460 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 LRRC43Q8N309 656 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 IQUBQ8NA54 791 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 SLC17A8Q8NDX2 589 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 URGCPQ8TCY9 931 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 ARNTL2Q8WYA1 636 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 EPSTI1Q96J88 318 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 PNMA5Q96PV4 448 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 TGS1Q96RS0 853 aaKnown RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 RUSC1Q9BVN2 902 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 MRPL9Q9BYD2 267 aaKnown RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 OSBPL7Q9BZF2 842 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 TMX1Q9H3N1 280 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 MAGEF1Q9HAY2 307 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 PARVGQ9HBI0 331 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 UBN1Q9NPG3 1134 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 AAASQ9NRG9 546 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 CIZ1Q9ULV3 898 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 YBX2Q9Y2T7 364 aaKnown RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 MYH9P35579 1960 aaKnown RBP5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 CNTNAP2Q9UHC6 1331 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 KAT6AQ92794 2004 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 CEP290O15078 2479 aa5.96□□□□□ -1.46
HMGB1P40-201ENST00000525121 A0A0U1RQF3 1178 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 TBKBP1A7MCY6 615 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 K7ENM7 598 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 K7ERI5 159 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 MGEA5O60502 916 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 TSPAN1O60635 241 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 DGKIO75912 1065 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 MYOGP15173 224 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 FOSL2P15408 326 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 GAP43P17677 238 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 CTNNB1P35222 781 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 DDIT3P35638 169 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 NPTX2P47972 431 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 TAP1Q03518 808 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 RNASELQ05823 741 aaKnown RBP5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 SCN5AQ14524 2016 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 MCM6Q14566 821 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 PTPROQ16827 1216 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 FAM187BQ17R55 369 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 DCAF4L1Q3SXM0 396 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 SLC27A1Q6PCB7 646 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 PPP4R3CPQ6ZMV5 832 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 STXBP4Q6ZWJ1 553 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 C1orf186Q6ZWK4 172 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 Q7L0L9 218 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 MYCT1Q8N699 235 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 PDILTQ8N807 584 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 FBXO22Q8NEZ5 403 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 SP7Q8TDD2 431 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 LEO1Q8WVC0 666 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 SPIRE2Q8WWL2 714 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 LINC01599Q8WXQ3 324 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 DHX58Q96C10 678 aa5.95□□□□□ -1.46
HMGB1P40-201ENST00000525121 BICD1Q96G01 975 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms