RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ELAC1Q9H777 363 aaKnown RBP7.71□□□□□ -1.18
HDAC3-206ENST00000471968 COL20A1Q9P218 1284 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 GINS2Q9Y248 185 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 AHCTF1Q8WYP5 2266 aa7.71□□□□□ -1.18
HDAC3-206ENST00000471968 A0A1B0GTL3 188 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 UPK3BL1B0FP48 263 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 UPK3BL2E5RIL1 263 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 DCLK1O15075 740 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 RPS6KA5O75582 802 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 PRDM1O75626 825 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 NR3C2P08235 984 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 EIF2S3P41091 472 aaKnown RBP7.7□□□□□ -1.18
HDAC3-206ENST00000471968 FAM189BP81408 668 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 LMAN2Q12907 356 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 UBAP2LQ14157 1087 aaKnown RBP7.7□□□□□ -1.18
HDAC3-206ENST00000471968 LRRC32Q14392 662 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 RALBP1Q15311 655 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 GRIK4Q16099 956 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 MARCH8Q5T0T0 291 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 HIST2H2BCQ6DN03 193 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 GRASPQ7Z6J2 395 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-206ENST00000471968 ZNF444Q8N0Y2 327 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-206ENST00000471968 SYTL5Q8TDW5 730 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-206ENST00000471968 TBC1D5Q92609 795 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 GPKOWQ92917 476 aaPredicted RBP eCLIP7.7□□□□□ -1.18
HDAC3-206ENST00000471968 VN1R3Q9BXE9 311 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 PRKD2Q9BZL6 878 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 TLR7Q9NYK1 1049 aaKnown RBP7.7□□□□□ -1.18
HDAC3-206ENST00000471968 HSPBP1Q9NZL4 362 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 PIAS3Q9Y6X2 628 aa7.7□□□□□ -1.18
HDAC3-206ENST00000471968 SPENQ96T58 3664 aaKnown RBP7.7□□□□□ -1.18
HDAC3-206ENST00000471968 TSC2P49815 1807 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 TCRBV5S4A2TA0A5A2 114 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 MBLAC1A4D2B0 266 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-206ENST00000471968 EXTL3O43909 919 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 ADH1AP07327 375 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 MYCLP12524 364 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-206ENST00000471968 CR2P20023 1033 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 CCNE1P24864 410 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 AK2P54819 239 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 CXADRP78310 365 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 GRM2Q14416 872 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 TRIP6Q15654 476 aaKnown RBP7.69□□□□□ -1.18
HDAC3-206ENST00000471968 USH1GQ495M9 461 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 CLLU1OSQ5K130 101 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 PDXDC2PQ6P474 469 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 KCNV1Q6PIU1 500 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 ZNF710Q8N1W2 664 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 HDDC3Q8N4P3 179 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 ITFG1Q8TB96 612 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 HELQQ8TDG4 1101 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 BRD9Q9H8M2 597 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 MRPL17Q9NRX2 175 aaKnown RBP7.69□□□□□ -1.18
HDAC3-206ENST00000471968 ZDHHC7Q9NXF8 308 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 DBNLQ9UJU6 430 aaKnown RBP7.69□□□□□ -1.18
HDAC3-206ENST00000471968 ST3GAL5Q9UNP4 418 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 NOC2LQ9Y3T9 749 aaKnown RBP7.69□□□□□ -1.18
HDAC3-206ENST00000471968 PTPRCP08575 1304 aa7.69□□□□□ -1.18
HDAC3-206ENST00000471968 CENPEQ02224 2701 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 CCDC163A0A0D9SF12 145 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 TEX28O15482 410 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 ECI2O75521 394 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 RPLP2P05387 115 aaKnown RBP7.68□□□□□ -1.18
HDAC3-206ENST00000471968 MYF5P13349 255 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 ENGP17813 658 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 MARK3P27448 753 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 GBP1P32455 592 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 KRT76Q01546 638 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 SP4Q02446 784 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 HNRNPDQ14103 355 aaKnown RBP7.68□□□□□ -1.18
HDAC3-206ENST00000471968 SLFNL1Q499Z3 407 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 TRIM61Q5EBN2 209 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 CYP2U1Q7Z449 544 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 RGS22Q8NE09 1264 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 CAMK1GQ96NX5 476 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 POLMQ9NP87 494 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-206ENST00000471968 SMC4Q9NTJ3 1288 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 ARPP21Q9UBL0 812 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-206ENST00000471968 MBD1Q9UIS9 605 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-206ENST00000471968 HDAC5Q9UQL6 1122 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 TELO2Q9Y4R8 837 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 SLC4A4Q9Y6R1 1079 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 BOD1L1Q8NFC6 3051 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 NAV3Q8IVL0 2385 aa7.68□□□□□ -1.18
HDAC3-206ENST00000471968 MINDY4BA8MYZ0 360 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 GPR182O15218 404 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 RRP8O43159 456 aaKnown RBP7.67□□□□□ -1.18
HDAC3-206ENST00000471968 PAPLNO95428 1278 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 TSPY3P0CV98 308 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 TSPY8P0CW00 308 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 TGFB3P10600 412 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 TOGARAM2Q6ZUX3 1019 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 CYFIP1Q7L576 1253 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 PALB2Q86YC2 1186 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 ZNF280BQ86YH2 543 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 MRPL50Q8N5N7 158 aaKnown RBP7.67□□□□□ -1.18
HDAC3-206ENST00000471968 TMEM40Q8WWA1 233 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 WBP1Q96G27 269 aa7.67□□□□□ -1.18
HDAC3-206ENST00000471968 NUSAP1Q9BXS6 441 aaKnown RBP7.67□□□□□ -1.18
HDAC3-206ENST00000471968 MRPL9Q9BYD2 267 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms