RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ANKRD35Q8N283 1001 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 CUEDC2Q9H467 287 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 DIAPH2O60879 1101 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 HERVK_113P62684 666 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 TRIM14Q14142 442 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 GUF1Q8N442 669 aaKnown RBP13.32□□□□□ -0.28
USP11-206ENST00000469080 NAA15Q9BXJ9 866 aaKnown RBP13.32□□□□□ -0.28
USP11-206ENST00000469080 VIPAS39Q9H9C1 493 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 ARHGAP20Q9P2F6 1191 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 SUGT1Q9Y2Z0 365 aa13.32□□□□□ -0.28
USP11-206ENST00000469080 KCNK3O14649 394 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 NR3C1P04150 777 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 KRT5P13647 590 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 FXR2P51116 673 aaKnown RBP eCLIP13.31□□□□□ -0.28
USP11-206ENST00000469080 EPC2Q52LR7 807 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 TRIM68Q6AZZ1 485 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 UHMK1Q8TAS1 419 aaKnown RBP13.31□□□□□ -0.28
USP11-206ENST00000469080 AP1M1Q9BXS5 423 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 HAUS4Q9H6D7 363 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 GGA3Q9NZ52 723 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 CORO1CQ9ULV4 474 aaPredicted RBP13.31□□□□□ -0.28
USP11-206ENST00000469080 C4BP0C0L5 1744 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 ZBED4O75132 1171 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 TUBBP07437 444 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 KRT13P13646 458 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 CAP2P40123 477 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 MTMR1Q13613 665 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 UNC45AQ9H3U1 944 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 EHMT1Q9H9B1 1298 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 CAPN11Q9UMQ6 739 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 DNAH12Q6ZR08 3092 aa13.31□□□□□ -0.28
USP11-206ENST00000469080 E7EVH7 732 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 EDIL3O43854 480 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 FOSP01100 380 aaPredicted RBP13.3□□□□□ -0.28
USP11-206ENST00000469080 IGBP1P78318 339 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 HDLBPQ00341 1268 aaKnown RBP13.3□□□□□ -0.28
USP11-206ENST00000469080 BIRC3Q13489 604 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 ARSHQ5FYA8 562 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 NLRX1Q86UT6 975 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 SH2D3CQ8N5H7 860 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 ZNF473Q8WTR7 871 aaKnown RBP13.3□□□□□ -0.28
USP11-206ENST00000469080 POP1Q99575 1024 aaKnown RBP13.3□□□□□ -0.28
USP11-206ENST00000469080 PARVGQ9HBI0 331 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 KCNH7Q9NS40 1196 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 ANKFY1Q9P2R3 1169 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 SEPT9Q9UHD8 586 aaPredicted RBP13.3□□□□□ -0.28
USP11-206ENST00000469080 CREB3O43889 395 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 HIP1RO75146 1068 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 AKAP3O75969 853 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 LINGO3P0C6S8 592 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 GUCY1A3Q02108 690 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 CCDC15Q0P6D6 951 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 PADI6Q6TGC4 694 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 RNF207Q6ZRF8 634 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 DNAJC19Q96DA6 116 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 SH2D4AQ9H788 454 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 RNF146Q9NTX7 359 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 C15orf41Q9Y2V0 281 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 REXO2Q9Y3B8 237 aaKnown RBP13.3□□□□□ -0.28
USP11-206ENST00000469080 GIT2Q14161 759 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 SND1Q7KZF4 910 aaKnown RBP eCLIP13.3□□□□□ -0.28
USP11-206ENST00000469080 TEKT4Q8WW24 435 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 CEP170P1Q96L14 293 aa13.3□□□□□ -0.28
USP11-206ENST00000469080 PPANQ9NQ55 473 aaKnown RBP13.3□□□□□ -0.28
USP11-206ENST00000469080 CALUO43852 315 aaPredicted RBP13.29□□□□□ -0.28
USP11-206ENST00000469080 RPL13P26373 211 aaKnown RBP13.29□□□□□ -0.28
USP11-206ENST00000469080 COPB2P35606 906 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 GCLCP48506 637 aaPredicted RBP13.29□□□□□ -0.28
USP11-206ENST00000469080 IFFO1Q0D2I5 559 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 PLCB4Q15147 1175 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 KNOP1Q1ED39 458 aaKnown RBP13.29□□□□□ -0.28
USP11-206ENST00000469080 MIIPQ5JXC2 388 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 PPP4R3AQ6IN85 833 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 CENPPQ6IPU0 288 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 IDI2Q9BXS1 227 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 OSBPL1AQ9BXW6 950 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 ACTR5Q9H9F9 607 aaPredicted RBP13.29□□□□□ -0.28
USP11-206ENST00000469080 ESYT2A0FGR8 921 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 PALMO75781 387 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 ATP4AP20648 1035 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 CNGA1P29973 690 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 RINT1Q6NUQ1 792 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 SWSAP1Q6NVH7 229 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 SDCCAG8Q86SQ7 713 aaPredicted RBP13.29□□□□□ -0.28
USP11-206ENST00000469080 TAX1BP1Q86VP1 789 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 PHC3Q8NDX5 983 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 MIPOL1Q8TD10 442 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 CTNNBL1Q8WYA6 563 aaPredicted RBP13.29□□□□□ -0.28
USP11-206ENST00000469080 CCDC51Q96ER9 411 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 SELENOOQ9BVL4 669 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 RIPK3Q9Y572 518 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 A0A087X0T9 212 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 PVALEFA0A1B0GWK0 134 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 LRRIQ4A6NIV6 560 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 ATP9AO75110 1047 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 ENTPD3O75355 529 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 FAM228BP0C875 321 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 NAT1P18440 290 aa13.29□□□□□ -0.28
USP11-206ENST00000469080 USP11P51784 963 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms