RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 KCNK18Q7Z418 384 aa23.04■■□□□ 1.28
PDGFA-204ENST00000405692 ECHDC2Q86YB7 292 aa23.04■■□□□ 1.28
PDGFA-204ENST00000405692 LINC00301Q8NCQ3 95 aa23.04■■□□□ 1.28
PDGFA-204ENST00000405692 RSPH1Q8WYR4 309 aa23.04■■□□□ 1.28
PDGFA-204ENST00000405692 PLIN2Q99541 437 aa23.04■■□□□ 1.28
PDGFA-204ENST00000405692 MINDY3Q9H8M7 445 aa23.04■■□□□ 1.28
PDGFA-204ENST00000405692 CERS4Q9HA82 394 aa23.04■■□□□ 1.28
PDGFA-204ENST00000405692 CFAP45Q9UL16 551 aa23.04■■□□□ 1.28
PDGFA-204ENST00000405692 SPTLC2O15270 562 aa23.03■■□□□ 1.28
PDGFA-204ENST00000405692 PPP6R2O75170 966 aa23.03■■□□□ 1.28
PDGFA-204ENST00000405692 ARHGEF15O94989 841 aa23.03■■□□□ 1.28
PDGFA-204ENST00000405692 PLA2G4BP0C869 781 aa23.03■■□□□ 1.28
PDGFA-204ENST00000405692 ABI1Q8IZP0 508 aa23.03■■□□□ 1.28
PDGFA-204ENST00000405692 DEPTORQ8TB45 409 aa23.03■■□□□ 1.28
PDGFA-204ENST00000405692 CCDC51Q96ER9 411 aa23.03■■□□□ 1.28
PDGFA-204ENST00000405692 C17orf75Q9HAS0 396 aa23.03■■□□□ 1.28
PDGFA-204ENST00000405692 TFIP11Q9UBB9 837 aaKnown RBP23.03■■□□□ 1.28
PDGFA-204ENST00000405692 DAXXQ9UER7 740 aaPredicted RBP23.03■■□□□ 1.28
PDGFA-204ENST00000405692 GTPBP6O43824 516 aaPredicted RBP23.02■■□□□ 1.28
PDGFA-204ENST00000405692 GUCY2CP25092 1073 aa23.02■■□□□ 1.28
PDGFA-204ENST00000405692 MBTD1Q05BQ5 628 aa23.02■■□□□ 1.28
PDGFA-204ENST00000405692 CDCA2Q69YH5 1023 aaPredicted RBP23.02■■□□□ 1.28
PDGFA-204ENST00000405692 NOTUMQ6P988 496 aa23.02■■□□□ 1.28
PDGFA-204ENST00000405692 C1orf186Q6ZWK4 172 aa23.02■■□□□ 1.28
PDGFA-204ENST00000405692 FBXO22Q8NEZ5 403 aa23.02■■□□□ 1.28
PDGFA-204ENST00000405692 PGBD4Q96DM1 585 aa23.02■■□□□ 1.28
PDGFA-204ENST00000405692 PRIMPOLQ96LW4 560 aa23.02■■□□□ 1.28
PDGFA-204ENST00000405692 PRMT7Q9NVM4 692 aaPredicted RBP23.02■■□□□ 1.28
PDGFA-204ENST00000405692 MTUS1Q9ULD2 1270 aa23.02■■□□□ 1.28
PDGFA-204ENST00000405692 PHLPP2Q6ZVD8 1323 aa23.02■■□□□ 1.28
PDGFA-204ENST00000405692 PLCG1P19174 1290 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 EFNA5P52803 228 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 SLC12A3P55017 1021 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 KARSQ15046 597 aaKnown RBP23.01■■□□□ 1.27
PDGFA-204ENST00000405692 TMEM192Q8IY95 271 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 RNF169Q8NCN4 708 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 CNNM3Q8NE01 707 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 KCNG4Q8TDN1 519 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 SYMPKQ92797 1274 aaKnown RBP23.01■■□□□ 1.27
PDGFA-204ENST00000405692 CLP1Q92989 425 aaKnown RBP23.01■■□□□ 1.27
PDGFA-204ENST00000405692 RUSC1Q9BVN2 902 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 TMEM117Q9H0C3 514 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 FAM105AQ9NUU6 356 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 ATP6V1DQ9Y5K8 247 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 LAMA2P24043 3122 aaKnown RBP23.01■■□□□ 1.27
PDGFA-204ENST00000405692 SZT2Q5T011 3432 aa23.01■■□□□ 1.27
PDGFA-204ENST00000405692 TBKBP1A7MCY6 615 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 TSPAN1O60635 241 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 ZNF623O75123 536 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 HIP1RO75146 1068 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 RB1P06400 928 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 IGFBP4P22692 258 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 HOXA11P31270 313 aaPredicted RBP23■■□□□ 1.27
PDGFA-204ENST00000405692 DMP1Q13316 513 aaPredicted RBP23■■□□□ 1.27
PDGFA-204ENST00000405692 PKP1Q13835 747 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 MAPK6Q16659 721 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 PAN2Q504Q3 1202 aaKnown RBP23■■□□□ 1.27
PDGFA-204ENST00000405692 EPC2Q52LR7 807 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 PPP4R3CPQ6ZMV5 832 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 EPSTI1Q96J88 318 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 CLIC6Q96NY7 704 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 C17orf80Q9BSJ5 609 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 STK17AQ9UEE5 414 aa23■■□□□ 1.27
PDGFA-204ENST00000405692 BRD1O95696 1058 aa22.99■■□□□ 1.27
PDGFA-204ENST00000405692 BMPR1AP36894 532 aa22.99■■□□□ 1.27
PDGFA-204ENST00000405692 FAM187BQ17R55 369 aa22.99■■□□□ 1.27
PDGFA-204ENST00000405692 FOXD4L6Q3SYB3 417 aaPredicted RBP22.99■■□□□ 1.27
PDGFA-204ENST00000405692 SPECC1Q5M775 1068 aa22.99■■□□□ 1.27
PDGFA-204ENST00000405692 RRAGBQ5VZM2 374 aa22.99■■□□□ 1.27
PDGFA-204ENST00000405692 FOXD4L3Q6VB84 417 aaPredicted RBP22.99■■□□□ 1.27
PDGFA-204ENST00000405692 ZNF598Q86UK7 904 aaKnown RBP22.99■■□□□ 1.27
PDGFA-204ENST00000405692 BSNDQ8WZ55 320 aa22.99■■□□□ 1.27
PDGFA-204ENST00000405692 LARP4BQ92615 738 aaKnown RBP22.99■■□□□ 1.27
PDGFA-204ENST00000405692 RAD54LQ92698 747 aa22.99■■□□□ 1.27
PDGFA-204ENST00000405692 PLVAPQ9BX97 442 aa22.99■■□□□ 1.27
PDGFA-204ENST00000405692 AAASQ9NRG9 546 aa22.99■■□□□ 1.27
PDGFA-204ENST00000405692 RBM19Q9Y4C8 960 aaKnown RBP22.99■■□□□ 1.27
PDGFA-204ENST00000405692 PCDHB2Q9Y5E7 798 aa22.99■■□□□ 1.27
PDGFA-204ENST00000405692 CCDC169A6NNP5 214 aa22.98■■□□□ 1.27
PDGFA-204ENST00000405692 FGFR1P11362 822 aa22.98■■□□□ 1.27
PDGFA-204ENST00000405692 POU3F3P20264 500 aaPredicted RBP22.98■■□□□ 1.27
PDGFA-204ENST00000405692 CTNNB1P35222 781 aa22.98■■□□□ 1.27
PDGFA-204ENST00000405692 DDIT3P35638 169 aa22.98■■□□□ 1.27
PDGFA-204ENST00000405692 SMTNP53814 917 aa22.98■■□□□ 1.27
PDGFA-204ENST00000405692 TMEM132AQ24JP5 1023 aa22.98■■□□□ 1.27
PDGFA-204ENST00000405692 SPOUT1Q5T280 376 aaKnown RBP22.98■■□□□ 1.27
PDGFA-204ENST00000405692 CCDC73Q6ZRK6 1079 aa22.98■■□□□ 1.27
PDGFA-204ENST00000405692 HACE1Q8IYU2 909 aa22.98■■□□□ 1.27
PDGFA-204ENST00000405692 C11orf84Q9BUA3 381 aaPredicted RBP22.98■■□□□ 1.27
PDGFA-204ENST00000405692 MRPL9Q9BYD2 267 aaKnown RBP22.98■■□□□ 1.27
PDGFA-204ENST00000405692 FZD8Q9H461 694 aa22.98■■□□□ 1.27
PDGFA-204ENST00000405692 LMCD1Q9NZU5 365 aa22.98■■□□□ 1.27
PDGFA-204ENST00000405692 ODF2LQ9ULJ1 636 aa22.98■■□□□ 1.27
PDGFA-204ENST00000405692 MRPL42Q9Y6G3 142 aaKnown RBP22.98■■□□□ 1.27
PDGFA-204ENST00000405692 C5orf67F2Z3F1 127 aa22.97■■□□□ 1.27
PDGFA-204ENST00000405692 CUTAO60888 179 aa22.97■■□□□ 1.27
PDGFA-204ENST00000405692 KRT18P05783 430 aaKnown RBP22.97■■□□□ 1.27
PDGFA-204ENST00000405692 ARF4P18085 180 aaPredicted RBP22.97■■□□□ 1.27
PDGFA-204ENST00000405692 GATMP50440 423 aa22.97■■□□□ 1.27
PDGFA-204ENST00000405692 PEX3P56589 373 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms