RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 NEO1Q92859 1461 aa18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 UBE4BO95155 1302 aa18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 TMEM247A6NEH6 219 aa18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 CASP1P29466 404 aa18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 NEK2P51955 445 aa18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 NAA30Q147X3 362 aaPredicted RBP18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 NAALADL2Q58DX5 795 aa18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 TTC8Q8TAM2 541 aa18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 OXER1Q8TDS5 423 aa18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 DDX17Q92841 729 aaKnown RBP18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 BSDC1Q9NW68 430 aaPredicted RBP18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 SNX12Q9UMY4 172 aa18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 SATB2Q9UPW6 733 aa18.2■□□□□ 0.5
SNAPC3-202ENST00000380821 EPHB1P54762 984 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 IRX1P78414 480 aaPredicted RBP18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 GPS1Q13098 491 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 PSD3Q9NYI0 1048 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 ZDHHC9Q9Y397 364 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 PITPNM2Q9BZ72 1349 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 POTEMA6NI47 508 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 CIITAP33076 1130 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 VAMP7P51809 220 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 TAP1Q03518 808 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 DRAP1Q14919 205 aaPredicted RBP18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 AGBL2Q5U5Z8 902 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 ENOSF1Q7L5Y1 443 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 AGGF1Q8N302 714 aaeCLIP18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 STAG2Q8N3U4 1231 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 FAM20AQ96MK3 541 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 WDR24Q96S15 920 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 MLXIPLQ9NP71 852 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 ARHGAP26Q9UNA1 814 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 SAMD9LQ8IVG5 1584 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 NLRP1Q9C000 1473 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 SFI1A8K8P3 1242 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 DIAPH2O60879 1101 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 AARSP49588 968 aaKnown RBP eCLIP18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 CCZ1BP86790 482 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 CCZ1P86791 482 aaPredicted RBP18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 FLOT2Q14254 428 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 LRRC14Q15048 493 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 IZUMO3Q5VZ72 239 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 DCPSQ96C86 337 aaKnown RBP18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 SMG5Q9UPR3 1016 aaKnown RBP18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 ANKARQ7Z5J8 1434 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 RNF103-CHMP3A0A140T963 221 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 HOXA13P31271 388 aaPredicted RBP18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 ZBTB1Q9Y2K1 713 aa18.19■□□□□ 0.5
SNAPC3-202ENST00000380821 PI4K2BG5E9Z4 385 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 OSTNP61366 133 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 HIC1Q14526 733 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 NCAPHQ15003 741 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 ADA2Q9NZK5 511 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 ADGRL3Q9HAR2 1447 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 CFAP69A5D8W1 941 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 PDXDC2PQ6P474 469 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 SHC4Q6S5L8 630 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 FRMD5Q7Z6J6 570 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 PPM1NQ8N819 430 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 NGRNQ9NPE2 291 aaKnown RBP18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 UBN2Q6ZU65 1347 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 ZFXP17010 805 aaPredicted RBP18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 KRT4P19013 534 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 IFNA8P32881 189 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 PRPF38AQ8NAV1 312 aaKnown RBP18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 MCPH1Q8NEM0 835 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 SLC26A7Q8TE54 656 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 SYF2O95926 243 aaKnown RBP18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 FTLP02792 175 aaPredicted RBP18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 NPR1P16066 1061 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 ZSCAN20P17040 1043 aaPredicted RBP18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 SLC1A1P43005 524 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 GCLMP48507 274 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 KRT17Q04695 432 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 TEX12Q9BXU0 123 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 KIF17Q9P2E2 1029 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 STX18Q9P2W9 335 aaKnown RBP18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 A0A1B0GTH6 734 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 SRGAP2CP0DJJ0 459 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 PPP6R3Q5H9R7 873 aaPredicted RBP18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 LRRC1Q9BTT6 524 aa18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 OLA1Q9NTK5 396 aaKnown RBP18.18■□□□□ 0.5
SNAPC3-202ENST00000380821 KDM6BO15054 1643 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 ALX1Q15699 326 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 SPDYE1Q8NFV5 336 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 MAGEB5Q9BZ81 275 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 GJB4Q9NTQ9 266 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 ASAP1Q9ULH1 1129 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 HPCAL4Q9UM19 191 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 E9PMD0 336 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 ZNF699Q32M78 642 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 PADI6Q6TGC4 694 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 TMEM179Q6ZVK1 233 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 FOXP4Q8IVH2 680 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 ABI1Q8IZP0 508 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 CDC26Q8NHZ8 85 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 FSD1LQ9BXM9 530 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 SLAIN2Q9P270 581 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 PGM1P36871 562 aa18.17■□□□□ 0.5
SNAPC3-202ENST00000380821 RASGRP2Q7LDG7 609 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms