RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 RIN2Q8WYP3 895 aaPredicted RBP16.83■□□□□ 0.29
HDAC5-202ENST00000336057 CHMP6Q96FZ7 201 aa16.83■□□□□ 0.29
HDAC5-202ENST00000336057 SLC38A10Q9HBR0 1119 aa16.83■□□□□ 0.29
HDAC5-202ENST00000336057 MAD2L2Q9UI95 211 aa16.83■□□□□ 0.29
HDAC5-202ENST00000336057 HERC5Q9UII4 1024 aaKnown RBP16.83■□□□□ 0.29
HDAC5-202ENST00000336057 ZBED1O96006 694 aa16.83■□□□□ 0.28
HDAC5-202ENST00000336057 CALB1P05937 261 aa16.83■□□□□ 0.28
HDAC5-202ENST00000336057 MYO1EQ12965 1108 aa16.83■□□□□ 0.28
HDAC5-202ENST00000336057 NAB2Q15742 525 aa16.83■□□□□ 0.28
HDAC5-202ENST00000336057 THNSL1Q8IYQ7 743 aa16.83■□□□□ 0.28
HDAC5-202ENST00000336057 PRPF38AQ8NAV1 312 aaKnown RBP16.83■□□□□ 0.28
HDAC5-202ENST00000336057 ECE1P42892 770 aa16.83■□□□□ 0.28
HDAC5-202ENST00000336057 NBPF9Q3BBW0 867 aa16.83■□□□□ 0.28
HDAC5-202ENST00000336057 ENOSF1Q7L5Y1 443 aa16.83■□□□□ 0.28
HDAC5-202ENST00000336057 TTC13Q8NBP0 860 aa16.83■□□□□ 0.28
HDAC5-202ENST00000336057 RNF25Q96BH1 459 aaPredicted RBP16.83■□□□□ 0.28
HDAC5-202ENST00000336057 HVCN1Q96D96 273 aa16.83■□□□□ 0.28
HDAC5-202ENST00000336057 ICE2Q659A1 982 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 FAM47EQ6ZV65 393 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 FBXL13Q8NEE6 735 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 NSUN6Q8TEA1 469 aaKnown RBP16.82■□□□□ 0.28
HDAC5-202ENST00000336057 TTC25Q96NG3 672 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 SNX25Q9H3E2 840 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 Q9H521 79 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 PSD3Q9NYI0 1048 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 LCMT1Q9UIC8 334 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 DCTN3O75935 186 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 FGFR2P21802 821 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 EPM2AIP1Q7L775 607 aaPredicted RBP16.82■□□□□ 0.28
HDAC5-202ENST00000336057 MMGT1Q8N4V1 131 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 SH2D3CQ8N5H7 860 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 FBXO41Q8TF61 875 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 NLRP4Q96MN2 994 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 DNAJC7Q99615 494 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 MEGF6O75095 1541 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 BRAFP15056 766 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 CCNA1P78396 465 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 PRPSAP1Q14558 356 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 DDX23Q9BUQ8 820 aaKnown RBP16.82■□□□□ 0.28
HDAC5-202ENST00000336057 SMARCAL1Q9NZC9 954 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 APEX2Q9UBZ4 518 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 PLAGL2Q9UPG8 496 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 SEC23AQ15436 765 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 MARCH10Q8NA82 808 aaPredicted RBP16.82■□□□□ 0.28
HDAC5-202ENST00000336057 CFAP36Q96G28 342 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 NYAP2Q9P242 653 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 GABBR1Q9UBS5 961 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 FHOD1Q9Y613 1164 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 PXDNQ92626 1479 aa16.82■□□□□ 0.28
HDAC5-202ENST00000336057 MYBL1P10243 752 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 TBXAS1P24557 533 aaPredicted RBP16.81■□□□□ 0.28
HDAC5-202ENST00000336057 FMO5P49326 533 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 EAPPQ56P03 285 aaPredicted RBP16.81■□□□□ 0.28
HDAC5-202ENST00000336057 LINC00116Q8NCU8 138 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 SLC35G2Q8TBE7 412 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 CRAMP1Q96RY5 1269 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 JMJD4Q9H9V9 463 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 TFR2Q9UP52 801 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 PALM3A6NDB9 673 aaPredicted RBP16.81■□□□□ 0.28
HDAC5-202ENST00000336057 RTN2O75298 545 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 SLC9A1P19634 815 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 MDH1P40925 334 aaKnown RBP16.81■□□□□ 0.28
HDAC5-202ENST00000336057 FAM47CQ5HY64 1035 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 PRR5LQ6MZQ0 368 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 RAPH1Q70E73 1250 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 LDHDQ86WU2 507 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 DNAAF3Q8N9W5 541 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 RNF146Q9NTX7 359 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 AFG3L2Q9Y4W6 797 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 ESRRAP11474 423 aaPredicted RBP16.81■□□□□ 0.28
HDAC5-202ENST00000336057 STXBP2Q15833 593 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 RHOT1Q8IXI2 618 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 HSPH1Q92598 858 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 KRT37O76014 449 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 NDUFB10O96000 172 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 ITKQ08881 620 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 TAF11Q15544 211 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 PCGF5Q86SE9 256 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 NLRP7Q8WX94 980 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 SYN2Q92777 582 aaPredicted RBP16.81■□□□□ 0.28
HDAC5-202ENST00000336057 SNF8Q96H20 258 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 SPC25Q9HBM1 224 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 MLXIPLQ9NP71 852 aa16.81■□□□□ 0.28
HDAC5-202ENST00000336057 KDM6AO15550 1401 aaPredicted RBP16.81■□□□□ 0.28
HDAC5-202ENST00000336057 EIF3HO15372 352 aaKnown RBP eCLIP16.8■□□□□ 0.28
HDAC5-202ENST00000336057 TTI1O43156 1089 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 MARK3P27448 753 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 PLA2G4AP47712 749 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 IFRD2Q12894 506 aaPredicted RBP16.8■□□□□ 0.28
HDAC5-202ENST00000336057 KIAA1755Q5JYT7 1200 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 CDKAL1Q5VV42 579 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 FUT8Q9BYC5 575 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 STRIP2Q9ULQ0 834 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 PITPNM2Q9BZ72 1349 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 TOM1L1O75674 476 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 GNA15P30679 374 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 DBN1Q16643 649 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 MAPK6Q16659 721 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 SLC27A3Q5K4L6 730 aa16.8■□□□□ 0.28
HDAC5-202ENST00000336057 SNRNP48Q6IEG0 339 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms