RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 GDF6Q6KF10 455 aaPredicted RBP13.75□□□□□ -0.21
SNX17-208ENST00000493711 FAM43BQ6ZT52 329 aaPredicted RBP13.75□□□□□ -0.21
SNX17-208ENST00000493711 DYMQ7RTS9 669 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 ANKRD33Q7Z3H0 272 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 SPATA20Q8TB22 786 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 TRAPPC12Q8WVT3 735 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 SPIRE2Q8WWL2 714 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 PAWRQ96IZ0 340 aaKnown RBP13.75□□□□□ -0.21
SNX17-208ENST00000493711 SH2D3AQ9BRG2 576 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 POLR3FQ9H1D9 316 aaPredicted RBP13.75□□□□□ -0.21
SNX17-208ENST00000493711 XPNPEP1Q9NQW7 623 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 EXOC1Q9NV70 894 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 PANK4Q9NVE7 773 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 KIAA1468Q9P260 1216 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 SUCLA2Q9P2R7 463 aaPredicted RBP13.75□□□□□ -0.21
SNX17-208ENST00000493711 FRMD3A2A2Y4 597 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 M0QZ92 97 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 TREHO43280 583 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 KIF20AO95235 890 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 RPN1P04843 607 aaKnown RBP13.74□□□□□ -0.21
SNX17-208ENST00000493711 NAMPTP43490 491 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 DMP1Q13316 513 aaPredicted RBP13.74□□□□□ -0.21
SNX17-208ENST00000493711 ALCAMQ13740 583 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 CAMK4Q16566 473 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 HERC4Q5GLZ8 1057 aaPredicted RBP13.74□□□□□ -0.21
SNX17-208ENST00000493711 NT5DC1Q5TFE4 455 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 CAVIN1Q6NZI2 390 aaKnown RBP13.74□□□□□ -0.21
SNX17-208ENST00000493711 ZNF410Q86VK4 478 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 GRAMD1CQ8IYS0 662 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 KIAA0319LQ8IZA0 1049 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 MYCT1Q8N699 235 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 TRIML1Q8N9V2 468 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 PRPF31Q8WWY3 499 aaKnown RBP13.74□□□□□ -0.21
SNX17-208ENST00000493711 STAMQ92783 540 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 TMEM143Q96AN5 459 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 BLZF1Q9H2G9 400 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 OLFML3Q9NRN5 406 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 AKT3Q9Y243 479 aa13.74□□□□□ -0.21
SNX17-208ENST00000493711 RHOBTB3O94955 611 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 PPP1R2P41236 205 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 CLCN3P51790 818 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 EFNA5P52803 228 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 RAD51AP2Q09MP3 1159 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 LAMTOR4Q0VGL1 99 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 MAPK7Q13164 816 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 BFSP2Q13515 415 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 PNOCQ13519 176 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 ODR4Q5SWX8 454 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 RBM43Q6ZSC3 357 aaKnown RBP13.73□□□□□ -0.21
SNX17-208ENST00000493711 UBE2Q1Q7Z7E8 422 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 LRRC71Q8N4P6 559 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 CAGE1Q8TC20 777 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 DIS3LQ8TF46 1054 aaKnown RBP13.73□□□□□ -0.21
SNX17-208ENST00000493711 NTPCRQ9BSD7 190 aaKnown RBP13.73□□□□□ -0.21
SNX17-208ENST00000493711 NFKBIZQ9BYH8 718 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
SNX17-208ENST00000493711 C2orf40Q9H1Z8 148 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 ZHX3Q9H4I2 956 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 PCDHA5Q9Y5H7 936 aa13.73□□□□□ -0.21
SNX17-208ENST00000493711 NPHP3-ACAD11A0A0J9YXS1 232 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 B4GALT4O60513 344 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 EN2P19622 333 aaPredicted RBP13.72□□□□□ -0.21
SNX17-208ENST00000493711 PHKA2P46019 1235 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 SARSP49591 514 aaKnown RBP13.72□□□□□ -0.21
SNX17-208ENST00000493711 RBL2Q08999 1139 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 COASYQ13057 564 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 PCBP1Q15365 356 aaKnown RBP eCLIP13.72□□□□□ -0.21
SNX17-208ENST00000493711 FAM26FQ5R3K3 315 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 RHPN2Q8IUC4 686 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 ZBTB8OSQ8IWT0 167 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 FAM178BQ8IXR5 827 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 FAM126BQ8IXS8 530 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 HS6ST3Q8IZP7 471 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 DAW1Q8N136 415 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 DEPTORQ8TB45 409 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 KCNN1Q92952 543 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 HVCN1Q96D96 273 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 FAM49AQ9H0Q0 323 aaPredicted RBP13.72□□□□□ -0.21
SNX17-208ENST00000493711 ST6GALNAC4Q9H4F1 302 aa13.72□□□□□ -0.21
SNX17-208ENST00000493711 TRMT13Q9NUP7 481 aaKnown RBP13.72□□□□□ -0.21
SNX17-208ENST00000493711 KLRC4O43908 158 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 PARNO95453 639 aaKnown RBP13.71□□□□□ -0.21
SNX17-208ENST00000493711 CD4P01730 458 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 GLRA2P23416 452 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 NPTX2P47972 431 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 MRPS6P82932 125 aaKnown RBP13.71□□□□□ -0.21
SNX17-208ENST00000493711 ZNF200P98182 395 aaPredicted RBP13.71□□□□□ -0.21
SNX17-208ENST00000493711 TLE2Q04725 743 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 EHHADHQ08426 723 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 HIC1Q14526 733 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 KMT5BQ4FZB7 885 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 SASS6Q6UVJ0 657 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 RUFY4Q6ZNE9 571 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 SFR1Q86XK3 245 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 DNAJB3Q8WWF6 145 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 SCLT1Q96NL6 688 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 HTATIP2Q9BUP3 242 aa13.71□□□□□ -0.21
SNX17-208ENST00000493711 GCOM2Q9BZD3 368 aaPredicted RBP13.71□□□□□ -0.21
SNX17-208ENST00000493711 TRPV6Q9H1D0 765 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms