RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 RIOK1Q9BRS2 568 aaKnown RBP6.38□□□□□ -1.39
PTPN4-210ENST00000485247 KANSL2Q9H9L4 492 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 SLC38A10Q9HBR0 1119 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 INCENPQ9NQS7 918 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 SWAP70Q9UH65 585 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 RALYQ9UKM9 306 aaKnown RBP6.38□□□□□ -1.39
PTPN4-210ENST00000485247 HDAC5Q9UQL6 1122 aa6.38□□□□□ -1.39
PTPN4-210ENST00000485247 NCOR2Q9Y618 2525 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 MYO7AQ13402 2215 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 TRIP12Q14669 1992 aaPredicted RBP6.37□□□□□ -1.39
PTPN4-210ENST00000485247 LOC100289279A0A1B0GTE1 492 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 SOWAHDA6NJG2 315 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 AMHP03971 560 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 CKBP12277 381 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 RRP1P56182 461 aaKnown RBP6.37□□□□□ -1.39
PTPN4-210ENST00000485247 HTRA4P83105 476 aaPredicted RBP6.37□□□□□ -1.39
PTPN4-210ENST00000485247 PTPN11Q06124 597 aaPredicted RBP6.37□□□□□ -1.39
PTPN4-210ENST00000485247 ADAM15Q13444 863 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 LRP8Q14114 963 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 CBX2Q14781 532 aaPredicted RBP6.37□□□□□ -1.39
PTPN4-210ENST00000485247 ST3GAL2Q16842 350 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 SPRED3Q2MJR0 410 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 TMEM105Q8N8V8 129 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 OR6J1Q8NGC5 347 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 KCNG4Q8TDN1 519 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 DHX38Q92620 1227 aaKnown RBP6.37□□□□□ -1.39
PTPN4-210ENST00000485247 UTP4Q969X6 686 aaKnown RBP6.37□□□□□ -1.39
PTPN4-210ENST00000485247 MYRFLQ96LU7 910 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 CCDC17Q96LX7 622 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 CTAGE1Q96RT6 745 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 YME1L1Q96TA2 773 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 RUSC1Q9BVN2 902 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 WDR11Q9BZH6 1224 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 CRNKL1Q9BZJ0 848 aaKnown RBP6.37□□□□□ -1.39
PTPN4-210ENST00000485247 NRSN2Q9GZP1 204 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 SOX17Q9H6I2 414 aaPredicted RBP6.37□□□□□ -1.39
PTPN4-210ENST00000485247 ANTXR1Q9H6X2 564 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 ACAD9Q9H845 621 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 LIN7BQ9HAP6 207 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 VTA1Q9NP79 307 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 NPHS2Q9NP85 383 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 ZFP64Q9NPA5 681 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 DCP1AQ9NPI6 582 aaPredicted RBP6.37□□□□□ -1.39
PTPN4-210ENST00000485247 A1CFQ9NQ94 594 aaKnown RBP6.37□□□□□ -1.39
PTPN4-210ENST00000485247 RNF112Q9ULX5 631 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 GVINP1Q7Z2Y8 2422 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 ZFHX4Q86UP3 3567 aa6.37□□□□□ -1.39
PTPN4-210ENST00000485247 TPRP12270 2363 aaKnown RBP6.36□□□□□ -1.39
PTPN4-210ENST00000485247 CYP2D7A0A087X1C5 515 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 A0A096LPE4 126 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 A0A1W2PPZ6 126 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 F5H6K3 240 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 GRM6O15303 877 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 DHX15O43143 795 aaKnown RBP6.36□□□□□ -1.39
PTPN4-210ENST00000485247 HYAL3O43820 417 aaPredicted RBP6.36□□□□□ -1.39
PTPN4-210ENST00000485247 PARNO95453 639 aaKnown RBP6.36□□□□□ -1.39
PTPN4-210ENST00000485247 EYA4O95677 639 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 NDUFB10O96000 172 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 ICAM3P32942 547 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 CTNNB1P35222 781 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 CDK8P49336 464 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 ARL4DP49703 201 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 KLRC3Q07444 240 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 PTPN21Q16825 1174 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 ZNF423Q2M1K9 1284 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 BRDTQ58F21 947 aaPredicted RBP6.36□□□□□ -1.39
PTPN4-210ENST00000485247 TNNI3KQ59H18 835 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 MSLNLQ96KJ4 702 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 PHF7Q9BWX1 381 aaPredicted RBP6.36□□□□□ -1.39
PTPN4-210ENST00000485247 USP26Q9BXU7 913 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 C7orf69Q9H7B7 122 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 RNF146Q9NTX7 359 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 CLEC1BQ9P126 229 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 STOML1Q9UBI4 398 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 FPGT-TNNI3KV9GXZ4 949 aa6.36□□□□□ -1.39
PTPN4-210ENST00000485247 NAV1Q8NEY1 1877 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 MEGF11A6BM72 1044 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 KPNA6O60684 536 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 CPNE3O75131 537 aaKnown RBP6.35□□□□□ -1.39
PTPN4-210ENST00000485247 ALAS1P13196 640 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 SP100P23497 879 aaPredicted RBP6.35□□□□□ -1.39
PTPN4-210ENST00000485247 OAZ1P54368 228 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 MTX1Q13505 466 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 KIAA0319Q5VV43 1072 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 ANKRD34AQ69YU3 496 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 FAM20CQ8IXL6 584 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 LCORLQ8N3X6 602 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 SMRP1Q8NCR6 262 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 DBF4BQ8NFT6 615 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 COPS5Q92905 334 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 TOP1MTQ969P6 601 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 ZNF512BQ96KM6 892 aaPredicted RBP6.35□□□□□ -1.39
PTPN4-210ENST00000485247 CITED4Q96RK1 184 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 TMPRSS13Q9BYE2 586 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 RBCK1Q9BYM8 510 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 NIF3L1Q9GZT8 377 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 USP15Q9Y4E8 981 aaPredicted RBP6.35□□□□□ -1.39
PTPN4-210ENST00000485247 PCDHGC5Q9Y5F6 944 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 SCN10AQ9Y5Y9 1956 aa6.35□□□□□ -1.39
PTPN4-210ENST00000485247 RAD50Q92878 1312 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms