RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 FAM196BA6NMK8 535 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 HEXIM1O94992 359 aaKnown RBP12.4□□□□□ -0.42
PTCH1-208ENST00000430669 PTPAQ15257 358 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 ZNF667Q5HYK9 610 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 VPS52Q8N1B4 723 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 TTC13Q8NBP0 860 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 CCT6BQ92526 530 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 WDR70Q9NW82 654 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 GOLGA8CPA6NN73 597 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 IFNB1P01574 187 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 TROVE2P10155 538 aaKnown RBP eCLIP12.4□□□□□ -0.42
PTCH1-208ENST00000430669 ARL13BQ3SXY8 428 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 TRIM42Q8IWZ5 723 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 MXRA8Q9BRK3 442 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 EPB41L5Q9HCM4 733 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 SREBF1P36956 1147 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 SLC12A2P55011 1212 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 DUOXA2Q1HG44 320 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 ZNF568Q3ZCX4 644 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 SCYL2Q6P3W7 929 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 SPON1Q9HCB6 807 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 HPSEQ9Y251 543 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 PALMO75781 387 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 INPP5BP32019 993 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 GOLGA8FQ08AF8 430 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 GOLGA8DPQ0D2H9 430 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 XKR3Q5GH77 459 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 KAZNQ674X7 775 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 STMN2Q93045 179 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 RIOX1Q9H6W3 641 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
PTCH1-208ENST00000430669 TYW5A2RUC4 315 aaKnown RBP12.4□□□□□ -0.43
PTCH1-208ENST00000430669 HMGB1P1B2RPK0 211 aaPredicted RBP12.4□□□□□ -0.43
PTCH1-208ENST00000430669 CRCPO75575 148 aa12.4□□□□□ -0.43
PTCH1-208ENST00000430669 TTBK2Q6IQ55 1244 aa12.4□□□□□ -0.43
PTCH1-208ENST00000430669 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.4□□□□□ -0.43
PTCH1-208ENST00000430669 MARK3P27448 753 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 STX2P32856 288 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 C2orf54Q08AI8 447 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 NTRK3Q16288 839 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 PTPN22Q9Y2R2 807 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 PRPSAP2O60256 369 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 CIITAP33076 1130 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 OSBPL9Q96SU4 736 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 ADGRG1Q9Y653 693 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 ARL1P40616 181 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-208ENST00000430669 SWSAP1Q6NVH7 229 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 COL23A1Q86Y22 540 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-208ENST00000430669 BEST2Q8NFU1 509 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.39□□□□□ -0.433e-6■■■■■ 50.8
PTCH1-208ENST00000430669 TTC26A0AVF1 554 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 GKAP1Q5VSY0 366 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-208ENST00000430669 RNF181Q9P0P0 153 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 ADAMTS1Q9UHI8 967 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 MRFAP1Q9Y605 127 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
PTCH1-208ENST00000430669 PLSCR1O15162 318 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 NT5DC1Q5TFE4 455 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 ADCY2Q08462 1091 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 SPOUT1Q5T280 376 aaKnown RBP12.39□□□□□ -0.43
PTCH1-208ENST00000430669 SYT2Q8N9I0 419 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-208ENST00000430669 DDX56Q9NY93 547 aaKnown RBP12.39□□□□□ -0.43
PTCH1-208ENST00000430669 BCAP29Q9UHQ4 241 aa12.39□□□□□ -0.43
PTCH1-208ENST00000430669 MAGEB2O15479 319 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 CHGBP05060 677 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 ERICH1Q86X53 443 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 RFX6Q8HWS3 928 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 PROCA1Q8NCQ7 364 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-208ENST00000430669 FBXL13Q8NEE6 735 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 KATNAL1Q9BW62 490 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 PDE11AQ9HCR9 933 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 RBAKQ9NYW8 714 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-208ENST00000430669 TMEM35BQ8NCS4 154 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 CABS1Q96KC9 395 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 REEP2Q9BRK0 252 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 SMARCAD1Q9H4L7 1026 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 SFI1A8K8P3 1242 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 PP2D1A8MPX8 630 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 GMNNO75496 209 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 KRT1P04264 644 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 TTC25Q96NG3 672 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 SLC38A10Q9HBR0 1119 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 APEX2Q9UBZ4 518 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 PPME1Q9Y570 386 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 NUB1Q9Y5A7 615 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 COL18A1P39060 1754 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 MYH7BA7E2Y1 1941 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 RTN2O75298 545 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 SLC1A1P43005 524 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 CACNA2D3Q8IZS8 1091 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 IL18RAPO95256 599 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 KRT7P08729 469 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 KLRK1P26718 216 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 CASP1P29466 404 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 ARL4AP40617 200 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 C6orf118Q5T5N4 469 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 ZBTB33Q86T24 672 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 MOV10L1Q9BXT6 1211 aaKnown RBP12.38□□□□□ -0.43
PTCH1-208ENST00000430669 MTFR1LQ9H019 292 aa12.38□□□□□ -0.43
PTCH1-208ENST00000430669 IP6K2Q9UHH9 426 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms