RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 ZBED1O96006 694 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 PMLP29590 882 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 SGO2Q562F6 1265 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 SH2D4BQ5SQS7 431 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 DCP1BQ8IZD4 617 aaKnown RBP10.57□□□□□ -0.72
SCAF11-202ENST00000369367 TSPYL2Q9H2G4 693 aaPredicted RBP10.57□□□□□ -0.72
SCAF11-202ENST00000369367 RBAKQ9NYW8 714 aaPredicted RBP10.57□□□□□ -0.72
SCAF11-202ENST00000369367 ADAM22Q9P0K1 906 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 IL18RAPO95256 599 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 SDC4P31431 198 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 CAP2P40123 477 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 RBP5P82980 135 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 LONRF3Q496Y0 759 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 AFG1LQ8WV93 481 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 DPF2Q92785 391 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 TMEM39BQ9GZU3 492 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 EHD4Q9H223 541 aa10.57□□□□□ -0.72
SCAF11-202ENST00000369367 NGRNQ9NPE2 291 aaKnown RBP10.57□□□□□ -0.72
SCAF11-202ENST00000369367 BUB1O43683 1085 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 BRD3Q15059 726 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 PPP2R2CQ9Y2T4 447 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 LRRD1A4D1F6 860 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 KRT3P12035 628 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 STX2P32856 288 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 VAMP7P51809 220 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 RASSF7Q02833 373 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 RWDD4Q6NW29 188 aaKnown RBP10.56□□□□□ -0.72
SCAF11-202ENST00000369367 CYFIP1Q7L576 1253 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 GUF1Q8N442 669 aaKnown RBP10.56□□□□□ -0.72
SCAF11-202ENST00000369367 MIF4GDA9UHW6 222 aaKnown RBP10.56□□□□□ -0.72
SCAF11-202ENST00000369367 MYBL1P10243 752 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 CYP2C9P11712 490 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 FKBP1AP62942 108 aaKnown RBP10.56□□□□□ -0.72
SCAF11-202ENST00000369367 STKLD1Q8NE28 680 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 HVCN1Q96D96 273 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 IRAK4Q9NWZ3 460 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 TLK1Q9UKI8 766 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 PGRMC1O00264 195 aaKnown RBP10.56□□□□□ -0.72
SCAF11-202ENST00000369367 NMT2O60551 498 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 TJP3O95049 919 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 TSTA3Q13630 321 aaPredicted RBP10.56□□□□□ -0.72
SCAF11-202ENST00000369367 GKAP1Q5VSY0 366 aaPredicted RBP10.56□□□□□ -0.72
SCAF11-202ENST00000369367 TTC23LQ6PF05 361 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 ATP6V1E2Q96A05 226 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 TMEM63CQ9P1W3 806 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 UBE4BO95155 1302 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 SPDYE2BA6NHP3 402 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 A8MXQ7 604 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 SPDYE6P0CI01 402 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 ITGA4P13612 1032 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 PCSK1P29120 753 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 BACE1P56817 501 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 HAUS6Q7Z4H7 955 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 SPATA2LQ8IUW3 424 aaPredicted RBP10.56□□□□□ -0.72
SCAF11-202ENST00000369367 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 ECEL1O95672 775 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 CTNNA1P35221 906 aaKnown RBP10.56□□□□□ -0.72
SCAF11-202ENST00000369367 BTBD8Q5XKL5 378 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 SPDYE1Q8NFV5 336 aaPredicted RBP10.56□□□□□ -0.72
SCAF11-202ENST00000369367 BAG5Q9UL15 447 aa10.56□□□□□ -0.72
SCAF11-202ENST00000369367 KDM4FA0A1W2PPD8 638 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 CASP14P31944 242 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 COASYQ13057 564 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 SOCS4Q8WXH5 440 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 MCUR1Q96AQ8 359 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 RILPQ96NA2 401 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 POTECB2RU33 542 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 STRNO43815 780 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 SLC26A2P50443 739 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 EHHADHQ08426 723 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 VSIG1Q86XK7 387 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 ANKEF1Q9NU02 776 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 ZFXP17010 805 aaPredicted RBP10.55□□□□□ -0.72
SCAF11-202ENST00000369367 CDC25AP30304 524 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 PAPOLAP51003 745 aaKnown RBP10.55□□□□□ -0.72
SCAF11-202ENST00000369367 FKBP1CQ5VVH2 108 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 KLC3Q6P597 504 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 RAPH1Q70E73 1250 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 CCDC13Q8IYE1 715 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 HDAC11Q96DB2 347 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 C17orf75Q9HAS0 396 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 PCDHB7Q9Y5E2 793 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 UBE2Q2LH0YL09 131 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 KRT7P08729 469 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 CDK17Q00537 523 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 FAM133AQ8N9E0 248 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 USH1CQ9Y6N9 552 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 DEPDC5O75140 1603 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 SLIT1O75093 1534 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 C17orf102A2RUQ5 167 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 ICAM1P05362 532 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 VPS41P49754 854 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 ST8SIA6P61647 398 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 EFHC2Q5JST6 749 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 POTEDQ86YR6 584 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 APPL2Q8NEU8 664 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 CEP72Q9P209 647 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 MAPRE1Q15691 268 aaKnown RBP10.55□□□□□ -0.72
SCAF11-202ENST00000369367 HAUS8Q9BT25 410 aa10.55□□□□□ -0.72
SCAF11-202ENST00000369367 CYP26B1Q9NR63 512 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms