RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 SMYD5Q6GMV2 418 aa6.8□□□□□ -1.32
SDCBP-213ENST00000630925 GABBR2O75899 941 aa6.8□□□□□ -1.32
SDCBP-213ENST00000630925 PRKAR2AP13861 404 aaKnown RBP6.8□□□□□ -1.32
SDCBP-213ENST00000630925 ANAPC15P60006 121 aa6.8□□□□□ -1.32
SDCBP-213ENST00000630925 SREK1Q8WXA9 508 aaKnown RBP6.79□□□□□ -1.32
SDCBP-213ENST00000630925 HIRIP3Q9BW71 556 aaPredicted RBP6.79□□□□□ -1.32
SDCBP-213ENST00000630925 PPME1Q9Y570 386 aa6.79□□□□□ -1.32
SDCBP-213ENST00000630925 SPDYE2BA6NHP3 402 aa6.78□□□□□ -1.32
SDCBP-213ENST00000630925 SPDYE6P0CI01 402 aa6.78□□□□□ -1.32
SDCBP-213ENST00000630925 E2F4Q16254 413 aa6.78□□□□□ -1.32
SDCBP-213ENST00000630925 SPDYE2Q495Y8 402 aa6.78□□□□□ -1.32
SDCBP-213ENST00000630925 HSP90AB4PQ58FF6 505 aa6.78□□□□□ -1.32
SDCBP-213ENST00000630925 POTEGQ6S5H5 508 aa6.78□□□□□ -1.32
SDCBP-213ENST00000630925 SPDYE1Q8NFV5 336 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-213ENST00000630925 SUGT1Q9Y2Z0 365 aa6.78□□□□□ -1.32
SDCBP-213ENST00000630925 IVNS1ABPQ9Y6Y0 642 aa6.78□□□□□ -1.32
SDCBP-213ENST00000630925 MIER1Q8N108 512 aa6.77□□□□□ -1.33
SDCBP-213ENST00000630925 MYH16Q9H6N6 1097 aa6.77□□□□□ -1.33
SDCBP-213ENST00000630925 MRRFQ96E11 262 aaKnown RBP6.77□□□□□ -1.33
SDCBP-213ENST00000630925 C8orf37Q96NL8 207 aa6.77□□□□□ -1.33
SDCBP-213ENST00000630925 VGFO15240 615 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-213ENST00000630925 GPIHBP1Q8IV16 184 aa6.76□□□□□ -1.33
SDCBP-213ENST00000630925 SLC52A1Q9NWF4 448 aa6.76□□□□□ -1.33
SDCBP-213ENST00000630925 TPD52L2O43399 206 aaKnown RBP6.75□□□□□ -1.33
SDCBP-213ENST00000630925 TXNDC2Q86VQ3 553 aa6.75□□□□□ -1.33
SDCBP-213ENST00000630925 CENPBP07199 599 aaPredicted RBP6.75□□□□□ -1.33
SDCBP-213ENST00000630925 RBM26Q5T8P6 1007 aaKnown RBP6.75□□□□□ -1.33
SDCBP-213ENST00000630925 ACIN1Q9UKV3 1341 aaKnown RBP6.75□□□□□ -1.33
SDCBP-213ENST00000630925 THOC2Q8NI27 1593 aaKnown RBP6.74□□□□□ -1.33
SDCBP-213ENST00000630925 CLCN6P51797 869 aa6.74□□□□□ -1.33
SDCBP-213ENST00000630925 PTMSP20962 102 aa6.73□□□□□ -1.33
SDCBP-213ENST00000630925 TSR1Q2NL82 804 aaKnown RBP6.73□□□□□ -1.33
SDCBP-213ENST00000630925 ZNF662Q6ZS27 426 aa6.73□□□□□ -1.33
SDCBP-213ENST00000630925 MICAL1Q8TDZ2 1067 aa6.73□□□□□ -1.33
SDCBP-213ENST00000630925 RBM27Q9P2N5 1060 aaKnown RBP6.73□□□□□ -1.33
SDCBP-213ENST00000630925 STK24Q9Y6E0 443 aa6.73□□□□□ -1.33
SDCBP-213ENST00000630925 CNPY4Q8N129 248 aa6.73□□□□□ -1.33
SDCBP-213ENST00000630925 SGSM3Q96HU1 749 aa6.73□□□□□ -1.33
SDCBP-213ENST00000630925 SGIP1Q9BQI5 828 aa6.73□□□□□ -1.33
SDCBP-213ENST00000630925 USTQ9Y2C2 406 aa6.73□□□□□ -1.33
SDCBP-213ENST00000630925 TCF3P15923 654 aa6.72□□□□□ -1.33
SDCBP-213ENST00000630925 GIMAP6Q6P9H5 292 aa6.72□□□□□ -1.33
SDCBP-213ENST00000630925 MYO15BQ96JP2 1530 aa6.72□□□□□ -1.33
SDCBP-213ENST00000630925 UBXN4Q92575 508 aa6.72□□□□□ -1.33
SDCBP-213ENST00000630925 DNAJC2Q99543 621 aaKnown RBP6.72□□□□□ -1.33
SDCBP-213ENST00000630925 SKIV2LQ15477 1246 aaKnown RBP6.71□□□□□ -1.34
SDCBP-213ENST00000630925 GRIPAP1Q4V328 841 aa6.71□□□□□ -1.34
SDCBP-213ENST00000630925 GORABQ5T7V8 394 aa6.71□□□□□ -1.34
SDCBP-213ENST00000630925 SPTY2D1Q68D10 685 aaPredicted RBP6.71□□□□□ -1.34
SDCBP-213ENST00000630925 GPATCH11Q8N954 259 aa6.71□□□□□ -1.34
SDCBP-213ENST00000630925 CLEC11AQ9Y240 323 aa6.71□□□□□ -1.34
SDCBP-213ENST00000630925 LAS1LQ9Y4W2 734 aaKnown RBP6.71□□□□□ -1.34
SDCBP-213ENST00000630925 TMTC2Q8N394 836 aa6.7□□□□□ -1.34
SDCBP-213ENST00000630925 PARP9Q8IXQ6 854 aa6.7□□□□□ -1.34
SDCBP-213ENST00000630925 RIMBP3CA6NJZ7 1639 aa6.69□□□□□ -1.34
SDCBP-213ENST00000630925 RIMBP3BA6NNM3 1639 aa6.69□□□□□ -1.34
SDCBP-213ENST00000630925 RIMBP3Q9UFD9 1639 aa6.69□□□□□ -1.34
SDCBP-213ENST00000630925 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-213ENST00000630925 CARNS1A5YM72 827 aa6.69□□□□□ -1.34
SDCBP-213ENST00000630925 RAB11FIP3O75154 756 aa6.69□□□□□ -1.34
SDCBP-213ENST00000630925 COG6Q9Y2V7 657 aa6.69□□□□□ -1.34
SDCBP-213ENST00000630925 FAM50AQ14320 339 aaKnown RBP6.69□□□□□ -1.34
SDCBP-213ENST00000630925 GSE1Q14687 1217 aa6.69□□□□□ -1.34
SDCBP-213ENST00000630925 PCMTD1Q96MG8 357 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-213ENST00000630925 CHRM1P11229 460 aaPredicted RBP6.68□□□□□ -1.34
SDCBP-213ENST00000630925 ZBTB47Q9UFB7 747 aaPredicted RBP6.68□□□□□ -1.34
SDCBP-213ENST00000630925 TBC1D12O60347 775 aa6.67□□□□□ -1.34
SDCBP-213ENST00000630925 ZNF330Q9Y3S2 320 aaPredicted RBP6.67□□□□□ -1.34
SDCBP-213ENST00000630925 MCCP23508 829 aa6.67□□□□□ -1.34
SDCBP-213ENST00000630925 MCCD1P59942 119 aaPredicted RBP6.67□□□□□ -1.34
SDCBP-213ENST00000630925 FAM43BQ6ZT52 329 aaPredicted RBP6.67□□□□□ -1.34
SDCBP-213ENST00000630925 BAZ1AQ9NRL2 1556 aaPredicted RBP6.67□□□□□ -1.34
SDCBP-213ENST00000630925 ZNF16P17020 682 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-213ENST00000630925 AMHR2Q16671 573 aa6.66□□□□□ -1.34
SDCBP-213ENST00000630925 TERF2IPQ9NYB0 399 aa6.65□□□□□ -1.34
SDCBP-213ENST00000630925 ZC3H6P61129 1189 aaKnown RBP6.65□□□□□ -1.35
SDCBP-213ENST00000630925 APBB1IPQ7Z5R6 666 aaPredicted RBP6.65□□□□□ -1.35
SDCBP-213ENST00000630925 NME8Q8N427 588 aa6.65□□□□□ -1.35
SDCBP-213ENST00000630925 PBXIP1Q96AQ6 731 aa6.65□□□□□ -1.35
SDCBP-213ENST00000630925 NESP48681 1621 aa6.65□□□□□ -1.35
SDCBP-213ENST00000630925 DNAJC14Q6Y2X3 702 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-213ENST00000630925 CDCA7Q9BWT1 371 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-213ENST00000630925 PPP1R1BQ9UD71 204 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-213ENST00000630925 GPR37O15354 613 aa6.64□□□□□ -1.35
SDCBP-213ENST00000630925 MLLT3P42568 568 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-213ENST00000630925 FOXD4L6Q3SYB3 417 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-213ENST00000630925 FOXD4L3Q6VB84 417 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-213ENST00000630925 RBM46Q8TBY0 533 aaKnown RBP6.64□□□□□ -1.35
SDCBP-213ENST00000630925 RALBP1Q15311 655 aa6.63□□□□□ -1.35
SDCBP-213ENST00000630925 GPATCH3Q96I76 525 aa6.63□□□□□ -1.35
SDCBP-213ENST00000630925 FOSBP53539 338 aa6.62□□□□□ -1.35
SDCBP-213ENST00000630925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.62□□□□□ -1.35
SDCBP-213ENST00000630925 CSB-PGBD3P0DP91 1061 aa6.62□□□□□ -1.35
SDCBP-213ENST00000630925 SRPK2P78362 688 aaKnown RBP6.62□□□□□ -1.35
SDCBP-213ENST00000630925 EVI5LQ96CN4 794 aa6.62□□□□□ -1.35
SDCBP-213ENST00000630925 GNEQ9Y223 722 aaKnown RBP6.62□□□□□ -1.35
SDCBP-213ENST00000630925 MAP4K4O95819 1239 aaPredicted RBP6.61□□□□□ -1.35
SDCBP-213ENST00000630925 SF3A1Q15459 793 aaKnown RBP6.61□□□□□ -1.35
SDCBP-213ENST00000630925 NAALADL2Q58DX5 795 aa6.61□□□□□ -1.35
SDCBP-213ENST00000630925 NOM1Q5C9Z4 860 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms