RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 CERKLQ49MI3 558 aaPredicted RBP15.72■□□□□ 0.11
VPS36-207ENST00000611132 TRIM42Q8IWZ5 723 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 PPP4R1Q8TF05 950 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 MTMR8Q96EF0 704 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 SAYSD1Q9NPB0 183 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 USH1CQ9Y6N9 552 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 MYBL2P10244 700 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 PLS3P13797 630 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 TBC1D9BQ66K14 1250 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 JAMLQ86YT9 394 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 ZNF526Q8TF50 670 aaPredicted RBP15.72■□□□□ 0.11
VPS36-207ENST00000611132 TLR10Q9BXR5 811 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 TRIM55Q9BYV6 548 aa15.72■□□□□ 0.11
VPS36-207ENST00000611132 SUCLA2Q9P2R7 463 aaPredicted RBP15.72■□□□□ 0.11
VPS36-207ENST00000611132 DDX20Q9UHI6 824 aaKnown RBP15.72■□□□□ 0.11
VPS36-207ENST00000611132 DBR1Q9UK59 544 aaKnown RBP15.72■□□□□ 0.11
VPS36-207ENST00000611132 A0A0G2JND7 137 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 POTEFA5A3E0 1075 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 POTEIP0CG38 1075 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 SETSIPP0DME0 302 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 PKN1Q16512 942 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 EARS2Q5JPH6 523 aaKnown RBP15.71■□□□□ 0.11
VPS36-207ENST00000611132 POTEGQ6S5H5 508 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 POTEEQ6S8J3 1075 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 LRRC34Q8IZ02 419 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 SLC35G2Q8TBE7 412 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 TEKT1Q969V4 418 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 WNT8AQ9H1J5 351 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 FAM53CQ9NYF3 392 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 STXBP3O00186 592 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 HSP90AA5PQ58FG0 334 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 KLHDC7AQ5VTJ3 777 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 KIF2BQ8N4N8 673 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 MORC4Q8TE76 937 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 FGFR1OP2Q9NVK5 253 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 IGF2BP3O00425 579 aaKnown RBP eCLIP15.71■□□□□ 0.11
VPS36-207ENST00000611132 PFDN1O60925 122 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 PDHBP11177 359 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 SLC9A1P19634 815 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 CDR2Q01850 454 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 SEC23AQ15436 765 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 XKR9Q5GH70 373 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 CASC4Q6P4E1 433 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 CENPUQ71F23 418 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 TRIM59Q8IWR1 403 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 CEP95Q96GE4 821 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 KDM4CQ9H3R0 1056 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 MRPL47Q9HD33 250 aaKnown RBP15.71■□□□□ 0.11
VPS36-207ENST00000611132 ANAPC7Q9UJX3 599 aa15.71■□□□□ 0.11
VPS36-207ENST00000611132 PDXKO00764 312 aa15.71■□□□□ 0.1
VPS36-207ENST00000611132 PHF2O75151 1096 aa15.71■□□□□ 0.1
VPS36-207ENST00000611132 ABL1P00519 1130 aa15.71■□□□□ 0.1
VPS36-207ENST00000611132 FAM153BP0C7A2 387 aa15.71■□□□□ 0.1
VPS36-207ENST00000611132 SLC29A2Q14542 456 aa15.71■□□□□ 0.1
VPS36-207ENST00000611132 FAM153CQ494X1 144 aa15.71■□□□□ 0.1
VPS36-207ENST00000611132 TTMPQ5BVD1 217 aa15.71■□□□□ 0.1
VPS36-207ENST00000611132 WDR11Q9BZH6 1224 aa15.71■□□□□ 0.1
VPS36-207ENST00000611132 DHX36Q9H2U1 1008 aaKnown RBP15.71■□□□□ 0.1
VPS36-207ENST00000611132 CNOT8Q9UFF9 292 aaKnown RBP15.71■□□□□ 0.1
VPS36-207ENST00000611132 FAM153AQ9UHL3 310 aa15.71■□□□□ 0.1
VPS36-207ENST00000611132 CASQ2O14958 399 aaPredicted RBP15.7■□□□□ 0.1
VPS36-207ENST00000611132 TOM1O60784 492 aa15.7■□□□□ 0.1
VPS36-207ENST00000611132 EDRF1Q3B7T1 1238 aa15.7■□□□□ 0.1
VPS36-207ENST00000611132 CENPPQ6IPU0 288 aa15.7■□□□□ 0.1
VPS36-207ENST00000611132 TRMT10CQ7L0Y3 403 aaKnown RBP15.7■□□□□ 0.1
VPS36-207ENST00000611132 RPUSD2Q8IZ73 545 aaKnown RBP15.7■□□□□ 0.1
VPS36-207ENST00000611132 POMGNT1Q8WZA1 660 aa15.7■□□□□ 0.1
VPS36-207ENST00000611132 CCNL1Q9UK58 526 aaPredicted RBP15.7■□□□□ 0.1
VPS36-207ENST00000611132 CYP19A1P11511 503 aaPredicted RBP15.7■□□□□ 0.1
VPS36-207ENST00000611132 COG7P83436 770 aa15.7■□□□□ 0.1
VPS36-207ENST00000611132 C12orf60Q5U649 245 aa15.7■□□□□ 0.1
VPS36-207ENST00000611132 CHURC1Q8WUH1 139 aa15.7■□□□□ 0.1
VPS36-207ENST00000611132 FAM84BQ96KN1 310 aaPredicted RBP15.7■□□□□ 0.1
VPS36-207ENST00000611132 PABPC3Q9H361 631 aaKnown RBP15.7■□□□□ 0.1
VPS36-207ENST00000611132 TSPOAP1O95153 1857 aa15.7■□□□□ 0.1
VPS36-207ENST00000611132 ANKRD20A8PQ5CZ79 823 aa15.7■□□□□ 0.1
VPS36-207ENST00000611132 ZNF746Q6NUN9 644 aaPredicted RBP15.7■□□□□ 0.1
VPS36-207ENST00000611132 PPP1R18Q6NYC8 613 aa15.7■□□□□ 0.1
VPS36-207ENST00000611132 YTHDF3Q7Z739 585 aaKnown RBP15.7■□□□□ 0.1
VPS36-207ENST00000611132 ZNF564Q8TBZ8 553 aaPredicted RBP15.7■□□□□ 0.1
VPS36-207ENST00000611132 NSUN4Q96CB9 384 aaKnown RBP15.7■□□□□ 0.1
VPS36-207ENST00000611132 HAUS5O94927 633 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 CTTNQ14247 550 aaKnown RBP15.69■□□□□ 0.1
VPS36-207ENST00000611132 SLC30A9Q6PML9 568 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 SMC1BQ8NDV3 1235 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 INTS2Q9H0H0 1204 aaKnown RBP15.69■□□□□ 0.1
VPS36-207ENST00000611132 NAGPAQ9UK23 515 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 USP17L15C9J2P7 530 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 USP17L13C9JLJ4 530 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 USP17L11C9JVI0 530 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 USP17L18D6R9N7 530 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 USP17L22D6RA61 530 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 USP17L17D6RBQ6 530 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 USP17L19D6RCP7 530 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 USP17L20D6RJB6 530 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 GSTA1P08263 222 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 SATB1Q01826 763 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 USP17L24Q0WX57 530 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 ITIH4Q14624 930 aa15.69■□□□□ 0.1
VPS36-207ENST00000611132 LONRF1Q17RB8 773 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms