RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 SEMA4AQ9H3S1 761 aa6.78□□□□□ -1.32
UBE2D3-218ENST00000505009 POFUT1Q9H488 388 aa6.78□□□□□ -1.32
UBE2D3-218ENST00000505009 SAE1Q9UBE0 346 aaPredicted RBP6.78□□□□□ -1.32
UBE2D3-218ENST00000505009 SLC30A1Q9Y6M5 507 aa6.78□□□□□ -1.32
UBE2D3-218ENST00000505009 C2orf78A6NCI8 922 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 GAS7O60861 476 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 APOL3O95236 402 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 ACO1P21399 889 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 FOXL1Q12952 345 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 KLHDC10Q6PID8 442 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 NOP9Q86U38 636 aaKnown RBP6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 NME9Q86XW9 330 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 TMEM176AQ96HP8 235 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 FEZ1Q99689 392 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 MYL10Q9BUA6 226 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 MS4A5Q9H3V2 200 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 IFT57Q9NWB7 429 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 DENND2AQ9ULE3 1009 aa6.77□□□□□ -1.33
UBE2D3-218ENST00000505009 LCHNA4D1U4 455 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 SLC26A4O43511 780 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 TGM5O43548 720 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 MSX2P35548 267 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 ZXDAP98168 799 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 DGKDQ16760 1214 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 HS1BP3Q53T59 392 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 POLNQ7Z5Q5 900 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 KIAA0907Q7Z7F0 614 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 KIF18BQ86Y91 864 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 SHCBP1Q8NEM2 672 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 NKD2Q969F2 451 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 MSL2Q9HCI7 577 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 KCMF1Q9P0J7 381 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 DNAI1Q9UI46 699 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 VWA7Q9Y334 891 aa6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 RBM8AQ9Y5S9 174 aaKnown RBP6.76□□□□□ -1.33
UBE2D3-218ENST00000505009 PRPF6O94906 941 aaKnown RBP6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 RPS19P39019 145 aaKnown RBP6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 SMAD3P84022 425 aaKnown RBP6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 ADCY2Q08462 1091 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 PRKD1Q15139 912 aaPredicted RBP6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 TAF7LQ5H9L4 462 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 KANSL1Q7Z3B3 1105 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 PHYKPLQ8IUZ5 450 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 Q8N1X5 172 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 ZNF808Q8N4W9 903 aaPredicted RBP6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 C7orf31Q8N865 590 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 MFSD3Q96ES6 412 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 DYDC2Q96IM9 177 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 GPR101Q96P66 508 aaPredicted RBP6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 TMPRSS5Q9H3S3 457 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 MTG2Q9H4K7 406 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 PLA2G3Q9NZ20 509 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 USP35Q9P2H5 1018 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 PLAAQ9Y263 795 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 TESMINQ9Y4I5 508 aa6.75□□□□□ -1.33
UBE2D3-218ENST00000505009 ELL2O00472 640 aaPredicted RBP6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 PLSCR1O15162 318 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 AMHP03971 560 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 HNRNPLP14866 589 aaKnown RBP eCLIP6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 ADCY7P51828 1080 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 ADAM8P78325 824 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 RIN1Q13671 783 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 GRM7Q14831 915 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 MAMDC4Q6UXC1 1216 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 EFHBQ8N7U6 833 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 SMC1BQ8NDV3 1235 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 EDAQ92838 391 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 RPL10LQ96L21 214 aaKnown RBP6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 ZNF747Q9BV97 191 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 SPTLC3Q9NUV7 552 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 POLR3BQ9NW08 1133 aaPredicted RBP6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 HECAQ9UBI9 543 aaPredicted RBP6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 TBX22Q9Y458 520 aa6.74□□□□□ -1.33
UBE2D3-218ENST00000505009 H2AFYO75367 372 aaKnown RBP6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 BPIFB4P59827 614 aa6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 ADCY1Q08828 1119 aa6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 KIAA1841Q6NSI8 718 aa6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 BMP8AQ7Z5Y6 402 aa6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 AHI1Q8N157 1196 aa6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 PPM1KQ8N3J5 372 aa6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 ANKRD53Q8N9V6 530 aa6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 RPGRQ92834 1020 aaKnown RBP6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 EXTL1Q92935 676 aa6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 ZNF496Q96IT1 587 aaPredicted RBP6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 WDR92Q96MX6 357 aa6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 GPHA2Q96T91 129 aa6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 PITHD1Q9GZP4 211 aaPredicted RBP6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 HAPLN2Q9GZV7 340 aa6.73□□□□□ -1.33
UBE2D3-218ENST00000505009 A0A087X0B3 334 aa6.72□□□□□ -1.33
UBE2D3-218ENST00000505009 A0A0A6YYJ9 748 aa6.72□□□□□ -1.33
UBE2D3-218ENST00000505009 A0A0A6YYK5 440 aaPredicted RBP6.72□□□□□ -1.33
UBE2D3-218ENST00000505009 GSG1L2A8MUP6 293 aa6.72□□□□□ -1.33
UBE2D3-218ENST00000505009 ENPP3O14638 875 aa6.72□□□□□ -1.33
UBE2D3-218ENST00000505009 MAFGO15525 162 aa6.72□□□□□ -1.33
UBE2D3-218ENST00000505009 C6P13671 934 aa6.72□□□□□ -1.33
UBE2D3-218ENST00000505009 ADCYAP1R1P41586 468 aa6.72□□□□□ -1.33
UBE2D3-218ENST00000505009 KPNA1P52294 538 aaPredicted RBP6.72□□□□□ -1.33
UBE2D3-218ENST00000505009 BCAR1P56945 870 aa6.72□□□□□ -1.33
UBE2D3-218ENST00000505009 TCIRG1Q13488 830 aa6.72□□□□□ -1.33
UBE2D3-218ENST00000505009 USP39Q53GS9 565 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms