RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TRIM43BA6NCK2 446 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 RSPH10B2B2RC85 870 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 PARNO95453 639 aaKnown RBP12.64□□□□□ -0.39
NUP50-216ENST00000486184 VTNP04004 478 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 RSPH10BP0C881 870 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 CYP11B2P19099 503 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 CYP2C18P33260 490 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 SYKP43405 635 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 CCL23P55773 120 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 CDC42EP1Q00587 391 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 AMPD3Q01432 767 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 RBL2Q08999 1139 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 TMEM62Q0P6H9 643 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 TFDP1Q14186 410 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 MCM6Q14566 821 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 ZNF618Q5T7W0 954 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 RHPN2Q8IUC4 686 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 KIAA0319LQ8IZA0 1049 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 NLRP7Q8WX94 980 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 WNT8BQ93098 351 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 TMEM143Q96AN5 459 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
NUP50-216ENST00000486184 DRC1Q96MC2 740 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 PPP1R16BQ96T49 567 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 TIPINQ9BVW5 301 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 POLR3FQ9H1D9 316 aaPredicted RBP12.64□□□□□ -0.39
NUP50-216ENST00000486184 MAGEF1Q9HAY2 307 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 BLOC1S4Q9NUP1 217 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 TRPV2Q9Y5S1 764 aa12.64□□□□□ -0.39
NUP50-216ENST00000486184 A0A087X0B3 334 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 ASAP2O43150 1006 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 TBCAO75347 108 aaKnown RBP12.63□□□□□ -0.39
NUP50-216ENST00000486184 RFC2P35250 354 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 SLC12A3P55017 1021 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 MXD4Q14582 209 aaPredicted RBP12.63□□□□□ -0.39
NUP50-216ENST00000486184 PPP2R5AQ15172 486 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 TRIM71Q2Q1W2 868 aaKnown RBP12.63□□□□□ -0.39
NUP50-216ENST00000486184 RINT1Q6NUQ1 792 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 RPAINQ86UA6 219 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 TMEM87AQ8NBN3 555 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 KIFAP3Q92845 792 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 IFT74Q96LB3 600 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 NLRP4Q96MN2 994 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 RUSC1Q9BVN2 902 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 CELF4Q9BZC1 486 aaKnown RBP12.63□□□□□ -0.39
NUP50-216ENST00000486184 XPNPEP1Q9NQW7 623 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 USP25Q9UHP3 1055 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 COL4A3BPQ9Y5P4 624 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 CDY2AQ9Y6F7 541 aa12.63□□□□□ -0.39
NUP50-216ENST00000486184 UMODL1Q5DID0 1318 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 PRPF40AO75400 957 aaKnown RBP12.62□□□□□ -0.39
NUP50-216ENST00000486184 IQCF3P0C7M6 154 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 NDUFA8P51970 172 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 NLRP11P59045 1033 aaKnown RBP12.62□□□□□ -0.39
NUP50-216ENST00000486184 UBE2HP62256 183 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 FPGSQ05932 587 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 RAD51AP2Q09MP3 1159 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 PPIGQ13427 754 aaKnown RBP eCLIP12.62□□□□□ -0.39
NUP50-216ENST00000486184 DRP2Q13474 957 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 KIZQ2M2Z5 673 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 MFSD5Q6N075 450 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 CLEC17AQ6ZS10 378 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 C1orf186Q6ZWK4 172 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 ZNF410Q86VK4 478 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 LINC01465Q8N7H1 131 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 PRPF31Q8WWY3 499 aaKnown RBP12.62□□□□□ -0.39
NUP50-216ENST00000486184 BADQ92934 168 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 SCLYQ96I15 445 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 TNMDQ9H2S6 317 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 ZHX3Q9H4I2 956 aa12.62□□□□□ -0.39
NUP50-216ENST00000486184 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.61□□□□□ -0.39
NUP50-216ENST00000486184 LRRIQ4A6NIV6 560 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 HIP1RO75146 1068 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 FAM13AO94988 1023 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 SRGAP2CP0DJJ0 459 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 GUCY2CP25092 1073 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 PHKA2P46019 1235 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 GPC3P51654 580 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 CRYBB1P53674 252 aaPredicted RBP12.61□□□□□ -0.39
NUP50-216ENST00000486184 FAM160A1Q05DH4 1040 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 LAMTOR4Q0VGL1 99 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 DMP1Q13316 513 aaPredicted RBP12.61□□□□□ -0.39
NUP50-216ENST00000486184 E2F4Q16254 413 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 NAALADL2Q58DX5 795 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 FAM26DQ5JW98 314 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 ODR4Q5SWX8 454 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 DYMQ7RTS9 669 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 DEFB128Q7Z7B8 93 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 RPUSD2Q8IZ73 545 aaKnown RBP12.61□□□□□ -0.39
NUP50-216ENST00000486184 CNNM3Q8NE01 707 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 OSMRQ99650 979 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 GCOM2Q9BZD3 368 aaPredicted RBP12.61□□□□□ -0.39
NUP50-216ENST00000486184 INO80BQ9C086 356 aaPredicted RBP12.61□□□□□ -0.39
NUP50-216ENST00000486184 WNT8AQ9H1J5 351 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 GOLPH3LQ9H4A5 285 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 GPRC5CQ9NQ84 441 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 SERTAD1Q9UHV2 236 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 KCNG1Q9UIX4 513 aa12.61□□□□□ -0.39
NUP50-216ENST00000486184 ODF2LQ9ULJ1 636 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms