RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	ADAMTS10	Q9H324	1103 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	OLFML3	Q9NRN5	406 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	DACT1	Q9NYF0	836 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	LARS	Q9P2J5	1176 aa	Known RBP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	WRAP73	Q9P2S5	460 aa	Predicted RBP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	SEPT9	Q9UHD8	586 aa	Predicted RBP	5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	ZDHHC9	Q9Y397	364 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	TELO2	Q9Y4R8	837 aa		5.66	□□□□□ -1.5
HDAC6-223	ENST00000480525	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	FRMD3	A2A2Y4	597 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	VWA3A	A6NCI4	1184 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	DDX39A	O00148	427 aa	Known RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	HOXA2	O43364	376 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	CHMP2A	O43633	222 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	NBN	O60934	754 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	MED24	O75448	989 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	EOMES	O95936	686 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	FGB	P02675	491 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	MYCN	P04198	464 aa	Predicted RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	CSF2RA	P15509	400 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	MARK3	P27448	753 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	THPO	P40225	353 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	CCT6A	P40227	531 aa	Known RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	PHKA2	P46019	1235 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	SLC12A3	P55017	1021 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	PTEN	P60484	403 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	FAM189B	P81408	668 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	HTRA4	P83105	476 aa	Predicted RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	AMPD3	Q01432	767 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	SP4	Q02446	784 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	GRB10	Q13322	594 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	ALCAM	Q13740	583 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	LPIN1	Q14693	890 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	STK38	Q15208	465 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	RAB30	Q15771	203 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	E2F4	Q16254	413 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	ECM1	Q16610	540 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	XKR9	Q5GH70	373 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	EFCAB12	Q6NXP0	572 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	PADI6	Q6TGC4	694 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	C1orf186	Q6ZWK4	172 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	C16orf59	Q7L2K0	433 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	CABP7	Q86V35	215 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	TPH2	Q8IWU9	490 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	BANK1	Q8NDB2	785 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	SP7	Q8TDD2	431 aa	Predicted RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	DNAJB3	Q8WWF6	145 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	LARP4B	Q92615	738 aa	Known RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	BAD	Q92934	168 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	WNT8B	Q93098	351 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	TOP1MT	Q969P6	601 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	HVCN1	Q96D96	273 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	CCDC43	Q96MW1	224 aa	Known RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	SAMD11	Q96NU1	681 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	GCOM2	Q9BZD3	368 aa	Predicted RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	UBE2O	Q9C0C9	1292 aa	Known RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	TMEM134	Q9H6X4	195 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	RC3H2	Q9HBD1	1191 aa	Known RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	IFT122	Q9HBG6	1241 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	ERVK-5	Q9HDB9	667 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	XPNPEP1	Q9NQW7	623 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	PRDM5	Q9NQX1	630 aa	Predicted RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	RGS18	Q9NS28	235 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	DDX19A	Q9NUU7	478 aa	Known RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	PRMT7	Q9NVM4	692 aa	Predicted RBP	5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	KBTBD4	Q9NVX7	518 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	RGL1	Q9NZL6	768 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	CHMP5	Q9NZZ3	219 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	PKD2L1	Q9P0L9	805 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	ARHGAP28	Q9P2N2	729 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	STK39	Q9UEW8	545 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	HPSE	Q9Y251	543 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	RWDD3	Q9Y3V2	267 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	PCDHA11	Q9Y5I1	949 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	COL4A3BP	Q9Y5P4	624 aa		5.65	□□□□□ -1.5
HDAC6-223	ENST00000480525	TDRD15	B5MCY1	1934 aa	Known RBP	5.65	□□□□□ -1.51
HDAC6-223	ENST00000480525	TRIP11	Q15643	1979 aa		5.65	□□□□□ -1.51
HDAC6-223	ENST00000480525		A0A0U1RQF3	1178 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	ARHGEF35	A5YM69	484 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	DDX11L8	A8MPP1	907 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	RPS6KA5	O75582	802 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	GJB5	O95377	273 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	PIGR	P01833	764 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	PRKCSH	P14314	528 aa	Predicted RBP	5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	GAP43	P17677	238 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	POU3F3	P20264	500 aa	Predicted RBP	5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	CYP2C18	P33260	490 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	SNRPF	P62306	86 aa	Known RBP	5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	CYP4A11	Q02928	519 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	NCBP1	Q09161	790 aa	Known RBP	5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	LAMTOR4	Q0VGL1	99 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	CTTN	Q14247	550 aa	Known RBP	5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	DSC3	Q14574	896 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	NBR1	Q14596	966 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	KYAT1	Q16773	422 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	MTERF2	Q49AM1	385 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	NAALADL2	Q58DX5	795 aa		5.64	□□□□□ -1.51
HDAC6-223	ENST00000480525	RESP18	Q5W5W9	173 aa		5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms