RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 ODF2LQ9ULJ1 636 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 HPSEQ9Y251 543 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 COL4A3BPQ9Y5P4 624 aa11.06□□□□□ -0.64
HDLBP-209ENST00000422933 A0A087WWV3 80 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 TMEM150BA6NC51 233 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 SMC2O95347 1197 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 C22orf31O95567 290 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 CD4P01730 458 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 IDEP14735 1019 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 GAP43P17677 238 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 SCP2P22307 547 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 GUCY2CP25092 1073 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 HOXC8P31273 242 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 MCM4P33991 863 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 AFMP43652 599 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 SLC12A3P55017 1021 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 ZNF200P98182 395 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-209ENST00000422933 DMP1Q13316 513 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-209ENST00000422933 MARCH8Q5T0T0 291 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 KRBA2Q6ZNG9 492 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 FAM43BQ6ZT52 329 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-209ENST00000422933 STXBP4Q6ZWJ1 553 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 MAEAQ7L5Y9 396 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 RPAINQ86UA6 219 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 RHPN2Q8IUC4 686 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 ZBTB8OSQ8IWT0 167 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 PPP1R13LQ8WUF5 828 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 DNAJB3Q8WWF6 145 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 NLRP7Q8WX94 980 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 SYAP1Q96A49 352 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-209ENST00000422933 GCOM2Q9BZD3 368 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-209ENST00000422933 GTPBP4Q9BZE4 634 aaKnown RBP11.05□□□□□ -0.64
HDLBP-209ENST00000422933 POLR3FQ9H1D9 316 aaPredicted RBP11.05□□□□□ -0.64
HDLBP-209ENST00000422933 HIPK3Q9H422 1215 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 BLOC1S4Q9NUP1 217 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 COL6A3P12111 3177 aa11.05□□□□□ -0.64
HDLBP-209ENST00000422933 IGKV6-21A0A0C4DH24 114 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 RSPH10B2B2RC85 870 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 ZBTB42B2RXF5 422 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 GADD45BO75293 160 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-209ENST00000422933 RSPH10BP0C881 870 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 SELPP16109 830 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 PHKA2P46019 1235 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 CLCN3P51790 818 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 ASIC1P78348 528 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 ADAM17P78536 824 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 MRPS6P82932 125 aaKnown RBP11.04□□□□□ -0.64
HDLBP-209ENST00000422933 FAAP100Q0VG06 881 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 E2F4Q16254 413 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 SKOR2Q2VWA4 1001 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-209ENST00000422933 LONRF3Q496Y0 759 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 C1orf186Q6ZWK4 172 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 KCNK18Q7Z418 384 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 ZNF410Q86VK4 478 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 C7orf61Q8IZ16 206 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 RPUSD2Q8IZ73 545 aaKnown RBP11.04□□□□□ -0.64
HDLBP-209ENST00000422933 LRRC71Q8N4P6 559 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 TMEM199Q8N511 208 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 MYCT1Q8N699 235 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 USP38Q8NB14 1042 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 DEPTORQ8TB45 409 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 PRPF31Q8WWY3 499 aaKnown RBP11.04□□□□□ -0.64
HDLBP-209ENST00000422933 DDX12PQ92771 950 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 TMEM143Q96AN5 459 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 LBHD1Q9BQE6 289 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-209ENST00000422933 C2orf40Q9H1Z8 148 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 PARVGQ9HBI0 331 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 LMBRD1Q9NUN5 540 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 KBTBD4Q9NVX7 518 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 SEL1LQ9UBV2 794 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 GINS2Q9Y248 185 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 TRPV2Q9Y5S1 764 aa11.04□□□□□ -0.64
HDLBP-209ENST00000422933 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-209ENST00000422933 LRRIQ4A6NIV6 560 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 CCDC169A6NNP5 214 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 SOX1O00570 391 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-209ENST00000422933 GTPBP6O43824 516 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-209ENST00000422933 HIP1RO75146 1068 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 KIF20AO95235 890 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 SRGAP2CP0DJJ0 459 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 RFC2P35250 354 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 NAMPTP43490 491 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 CRYBB1P53674 252 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-209ENST00000422933 NLRP11P59045 1033 aaKnown RBP11.03□□□□□ -0.64
HDLBP-209ENST00000422933 POU5F1BQ06416 359 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 RAD51AP2Q09MP3 1159 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 LAMTOR4Q0VGL1 99 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 PCBP1Q15365 356 aaKnown RBP eCLIP11.03□□□□□ -0.64
HDLBP-209ENST00000422933 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 DYMQ7RTS9 669 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 ELOA2Q8IYF1 753 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-209ENST00000422933 KIAA0319LQ8IZA0 1049 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 FMR1NBQ8N0W7 255 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-209ENST00000422933 NLRP4Q96MN2 994 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 C7orf25Q9BPX7 421 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 RUSC1Q9BVN2 902 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 CELF4Q9BZC1 486 aaKnown RBP11.03□□□□□ -0.64
HDLBP-209ENST00000422933 GOLPH3LQ9H4A5 285 aa11.03□□□□□ -0.64
HDLBP-209ENST00000422933 KMT5AQ9NQR1 393 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms