RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 KCNV1Q6PIU1 500 aa15.14■□□□□ 0.01
PTPRF-202ENST00000372405 WDR59Q6PJI9 974 aa15.14■□□□□ 0.01
PTPRF-202ENST00000372405 SAPCD2Q86UD0 394 aa15.14■□□□□ 0.01
PTPRF-202ENST00000372405 RETREG2Q8NC44 543 aa15.14■□□□□ 0.01
PTPRF-202ENST00000372405 TMEM161BQ8NDZ6 487 aa15.14■□□□□ 0.01
PTPRF-202ENST00000372405 AFAP1L1Q8TED9 768 aa15.14■□□□□ 0.01
PTPRF-202ENST00000372405 SEPT1Q8WYJ6 367 aa15.14■□□□□ 0.01
PTPRF-202ENST00000372405 GPR20Q99678 358 aa15.14■□□□□ 0.01
PTPRF-202ENST00000372405 NAA15Q9BXJ9 866 aaKnown RBP15.14■□□□□ 0.01
PTPRF-202ENST00000372405 NIFKQ9BYG3 293 aaKnown RBP15.14■□□□□ 0.01
PTPRF-202ENST00000372405 MLXIPQ9HAP2 919 aa15.14■□□□□ 0.01
PTPRF-202ENST00000372405 ARMCX3Q9UH62 379 aaPredicted RBP15.14■□□□□ 0.01
PTPRF-202ENST00000372405 LUC7L2Q9Y383 392 aaKnown RBP15.14■□□□□ 0.01
PTPRF-202ENST00000372405 PASKQ96RG2 1323 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 STRNO43815 780 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 KCNH2Q12809 1159 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 ALCAMQ13740 583 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 GRB14Q14449 540 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 TAPT1Q6NXT6 567 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 REXO1L1PQ8IX06 675 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 OR8K1Q8NGG5 319 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 KIFAP3Q92845 792 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 PCMTD1Q96MG8 357 aaPredicted RBP15.13■□□□□ 0.01
PTPRF-202ENST00000372405 NTPCRQ9BSD7 190 aaKnown RBP15.13■□□□□ 0.01
PTPRF-202ENST00000372405 DESI2Q9BSY9 194 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 NUP58Q9BVL2 599 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 KATNBL1Q9H079 304 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 ATP6V0A4Q9HBG4 840 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 FAM207AQ9NSI2 230 aaPredicted RBP15.13■□□□□ 0.01
PTPRF-202ENST00000372405 A0A1W2PQJ5 194 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 STAT5BP51692 787 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 EMC2Q15006 297 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 TARBP2Q15633 366 aaKnown RBP15.13■□□□□ 0.01
PTPRF-202ENST00000372405 DNTTIP2Q5QJE6 756 aaKnown RBP15.13■□□□□ 0.01
PTPRF-202ENST00000372405 MAMDC4Q6UXC1 1216 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 HS2ST1Q7LGA3 356 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 TRIM50Q86XT4 487 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 SLC9A9Q8IVB4 645 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 MCPH1Q8NEM0 835 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 SLC35C1Q96A29 364 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 CHP1Q99653 195 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 DHX33Q9H6R0 707 aaKnown RBP15.13■□□□□ 0.01
PTPRF-202ENST00000372405 FAM184BQ9ULE4 1060 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 PPP2R2CQ9Y2T4 447 aa15.13■□□□□ 0.01
PTPRF-202ENST00000372405 ZNF236Q9UL36 1845 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 LGR5O75473 907 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 NOL4O94818 638 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 TXNP10599 105 aaKnown RBP15.12■□□□□ 0.01
PTPRF-202ENST00000372405 EPB41P11171 864 aaKnown RBP15.12■□□□□ 0.01
PTPRF-202ENST00000372405 CYP2J2P51589 502 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 RTP1P59025 263 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 ZBED6P86452 979 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 APBA1Q02410 837 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 DMP1Q13316 513 aaPredicted RBP15.12■□□□□ 0.01
PTPRF-202ENST00000372405 SYCP3Q8IZU3 236 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 SPIRE2Q8WWL2 714 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 ACCSQ96QU6 501 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 CRACR2AQ9BSW2 395 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 MMRN2Q9H8L6 949 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 CPA4Q9UI42 421 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 DIS3Q9Y2L1 958 aaKnown RBP15.12■□□□□ 0.01
PTPRF-202ENST00000372405 IVNS1ABPQ9Y6Y0 642 aa15.12■□□□□ 0.01
PTPRF-202ENST00000372405 SIP14410 1827 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 CCDC169A6NNP5 214 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 SNAI1O95863 264 aaPredicted RBP15.11■□□□□ 0.01
PTPRF-202ENST00000372405 MEA1Q16626 185 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 GJC2Q5T442 439 aaPredicted RBP15.11■□□□□ 0.01
PTPRF-202ENST00000372405 RGMBQ6NW40 437 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 DPY19L2P1Q6NXN4 242 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 ZNF467Q7Z7K2 595 aaPredicted RBP15.11■□□□□ 0.01
PTPRF-202ENST00000372405 FAM186BQ8IYM0 893 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 ZSWIM2Q8NEG5 633 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 SCFD2Q8WU76 684 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 TMEM174Q8WUU8 243 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 CBWD1Q9BRT8 395 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 MKNK1Q9BUB5 465 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 POLR3FQ9H1D9 316 aaPredicted RBP15.11■□□□□ 0.01
PTPRF-202ENST00000372405 TMEM206Q9H813 350 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 C17orf75Q9HAS0 396 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 METTL14Q9HCE5 456 aaKnown RBP15.11■□□□□ 0.01
PTPRF-202ENST00000372405 TBX20Q9UMR3 447 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 XRCC5P13010 732 aaKnown RBP15.11■□□□□ 0.01
PTPRF-202ENST00000372405 TNNT1P13805 278 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 PSMC2P35998 433 aaKnown RBP15.11■□□□□ 0.01
PTPRF-202ENST00000372405 POLGP54098 1239 aaPredicted RBP15.11■□□□□ 0.01
PTPRF-202ENST00000372405 TTLL4Q14679 1199 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 FAM160B1Q5W0V3 765 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 PLEKHH3Q7Z736 793 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 TMTC1Q8IUR5 882 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 DHX37Q8IY37 1157 aaKnown RBP15.11■□□□□ 0.01
PTPRF-202ENST00000372405 GOLGA5Q8TBA6 731 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 BAP1Q92560 729 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 TMEM143Q96AN5 459 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 SPATA33Q96N06 139 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 KMT5AQ9NQR1 393 aa15.11■□□□□ 0.01
PTPRF-202ENST00000372405 A0A0U1RQJ8 604 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 DENND3A2RUS2 1198 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 MANSC4A6NHS7 340 aaPredicted RBP15.1■□□□□ 0.01
PTPRF-202ENST00000372405 ZBTB42B2RXF5 422 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 ARHGAP1Q07960 439 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms