RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 ZNF18P17022 549 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 HMGCS2P54868 508 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 PPP2R5AQ15172 486 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 SF3B3Q15393 1217 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 KNOP1Q1ED39 458 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 PPP6R3Q5H9R7 873 aaPredicted RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 IWS1Q96ST2 819 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 MED10Q9BTT4 135 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 LACRTQ9GZZ8 138 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 PI4K2BG5E9Z4 385 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 STAM2O75886 525 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 STAMBPO95630 424 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 NR1D1P20393 614 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 PMS1P54277 932 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 CASP7P55210 303 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 SLC8A3P57103 927 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 NTRK3Q16288 839 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 TMCO4Q5TGY1 634 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 DCAF15Q66K64 600 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 ZNF772Q68DY9 489 aaPredicted RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 RCSD1Q6JBY9 416 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 SDCCAG8Q86SQ7 713 aaPredicted RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 CCNYQ8ND76 341 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 SPATA4Q8NEY3 305 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 ACER1Q8TDN7 264 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 COG1Q8WTW3 980 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 ATP6V0A1Q93050 837 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 FMO2Q99518 471 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 PLA2G12BQ9BX93 195 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 KCNQ5Q9NR82 932 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 COL24A1Q17RW2 1714 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 A0A087X0B3 334 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 STXBP3O00186 592 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 TRIM66O15016 1216 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 TNNC2P02585 160 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 KCNJ1P48048 391 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 ACOT2P49753 483 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 ZNF543Q08ER8 600 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 KCTD2Q14681 263 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 FBXO33Q7Z6M2 555 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 LDHDQ86WU2 507 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 RFX6Q8HWS3 928 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 RPUSD2Q8IZ73 545 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 ELAC2Q9BQ52 826 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 MAGEF1Q9HAY2 307 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 CNOT8Q9UFF9 292 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 PARP2Q9UGN5 583 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 EMSYQ7Z589 1322 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 URB1O60287 2271 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 COL5A3P25940 1745 aaPredicted RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 PPP1R3GB7ZBB8 358 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 ASNSP08243 561 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 CLNS1AP54105 237 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 DR1Q01658 176 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 GUCY1A3Q02108 690 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 MTMR3Q13615 1198 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 RCN2Q14257 317 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 NEDD9Q14511 834 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 CYP2W1Q8TAV3 490 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 GOLGA5Q8TBA6 731 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 MICAL1Q8TDZ2 1067 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 DCPSQ96C86 337 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 REEP2Q9BRK0 252 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 RIOK1Q9BRS2 568 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 NACA2Q9H009 215 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 RNF146Q9NTX7 359 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 POLLQ9UGP5 575 aa9.82□□□□□ -0.84
SMARCA1-202ENST00000371122 CYP26A1O43174 497 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 BAG2O95816 211 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 CASP4P49662 377 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 CCDC93Q567U6 631 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 OR6B2Q6IFH4 312 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 ZNF449Q6P9G9 518 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 PODNQ7Z5L7 613 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 STMN2Q93045 179 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 PI4K2AQ9BTU6 479 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 MSTO1Q9BUK6 570 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 JMJD4Q9H9V9 463 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 INTUQ9ULD6 942 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 FZD1Q9UP38 647 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 FIS1Q9Y3D6 152 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 FHOD1Q9Y613 1164 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 KRT1P04264 644 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 AGBL1Q96MI9 1066 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 TRIM51Q9BSJ1 452 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 HOMER3Q9NSC5 361 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 MKRN1Q9UHC7 482 aaKnown RBP9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 CNTRLQ7Z7A1 2325 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 PASKQ96RG2 1323 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 GOLGA8KD6RF30 607 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 MAGOHP61326 146 aaKnown RBP9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 ERVK-24P63145 666 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 EZH2Q15910 746 aaKnown RBP9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 SLC27A3Q5K4L6 730 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 HIBCHQ6NVY1 386 aaPredicted RBP9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 SAMD7Q7Z3H4 446 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 GUF1Q8N442 669 aaKnown RBP9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 HSPH1Q92598 858 aa9.81□□□□□ -0.84
SMARCA1-202ENST00000371122 CELF4Q9BZC1 486 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms