RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 U2AF2P26368 475 aaKnown RBP eCLIP29.6■■■□□ 2.33
PPP4R1-204ENST00000577393 GJB2P29033 226 aa29.6■■■□□ 2.33
PPP4R1-204ENST00000577393 CRYBB1P53674 252 aaPredicted RBP29.6■■■□□ 2.33
PPP4R1-204ENST00000577393 ZNF174Q15697 407 aa29.6■■■□□ 2.33
PPP4R1-204ENST00000577393 TMEM266Q2M3C6 531 aa29.6■■■□□ 2.33
PPP4R1-204ENST00000577393 PLA2G4FQ68DD2 849 aa29.6■■■□□ 2.33
PPP4R1-204ENST00000577393 TMEM40Q8WWA1 233 aa29.6■■■□□ 2.33
PPP4R1-204ENST00000577393 LXNQ9BS40 222 aa29.6■■■□□ 2.33
PPP4R1-204ENST00000577393 CERS4Q9HA82 394 aa29.6■■■□□ 2.33
PPP4R1-204ENST00000577393 NOC2LQ9Y3T9 749 aaKnown RBP29.6■■■□□ 2.33
PPP4R1-204ENST00000577393 INSL6Q9Y581 213 aa29.6■■■□□ 2.33
PPP4R1-204ENST00000577393 CTTNQ14247 550 aaKnown RBP29.59■■■□□ 2.33
PPP4R1-204ENST00000577393 C4orf19Q8IY42 314 aa29.59■■■□□ 2.33
PPP4R1-204ENST00000577393 GAS2L1Q99501 681 aaPredicted RBP29.59■■■□□ 2.33
PPP4R1-204ENST00000577393 OSMRQ99650 979 aa29.59■■■□□ 2.33
PPP4R1-204ENST00000577393 RPS6KA5O75582 802 aa29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 TRAPPC10P48553 1259 aa29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 NLRP11P59045 1033 aaKnown RBP29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 HTRA4P83105 476 aaPredicted RBP29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 CYP4A11Q02928 519 aa29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 TTC38Q5R3I4 469 aa29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 RTN4RL1Q86UN2 441 aaPredicted RBP29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 LINC01599Q8WXQ3 324 aa29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 EIF2AK1Q9BQI3 630 aaKnown RBP29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 FTHL17Q9BXU8 183 aa29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 NOL7Q9UMY1 257 aaKnown RBP29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 SMC3Q9UQE7 1217 aa29.58■■■□□ 2.33
PPP4R1-204ENST00000577393 IGKV6-21A0A0C4DH24 114 aa29.57■■■□□ 2.32
PPP4R1-204ENST00000577393 NPEPPSP55786 919 aa29.57■■■□□ 2.32
PPP4R1-204ENST00000577393 NFX1Q12986 1120 aaKnown RBP29.57■■■□□ 2.32
PPP4R1-204ENST00000577393 ORC2Q13416 577 aaPredicted RBP29.57■■■□□ 2.32
PPP4R1-204ENST00000577393 DRP2Q13474 957 aa29.57■■■□□ 2.32
PPP4R1-204ENST00000577393 SPRED2Q7Z698 418 aa29.57■■■□□ 2.32
PPP4R1-204ENST00000577393 ADAMTS10Q9H324 1103 aa29.57■■■□□ 2.32
PPP4R1-204ENST00000577393 TMX1Q9H3N1 280 aa29.57■■■□□ 2.32
PPP4R1-204ENST00000577393 ZSWIM4Q9H7M6 989 aa29.57■■■□□ 2.32
PPP4R1-204ENST00000577393 ERVK-5Q9HDB9 667 aa29.57■■■□□ 2.32
PPP4R1-204ENST00000577393 CYP26B1Q9NR63 512 aa29.57■■■□□ 2.32
PPP4R1-204ENST00000577393 MAFO75444 373 aaPredicted RBP29.56■■■□□ 2.32
PPP4R1-204ENST00000577393 SLITRK3O94933 977 aa29.56■■■□□ 2.32
PPP4R1-204ENST00000577393 ADGRE1Q14246 886 aa29.56■■■□□ 2.32
PPP4R1-204ENST00000577393 TPH2Q8IWU9 490 aa29.56■■■□□ 2.32
PPP4R1-204ENST00000577393 MAFAQ8NHW3 353 aaPredicted RBP29.56■■■□□ 2.32
PPP4R1-204ENST00000577393 HSD17B14Q9BPX1 270 aa29.56■■■□□ 2.32
PPP4R1-204ENST00000577393 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.56■■■□□ 2.32
PPP4R1-204ENST00000577393 LINC01553A4QN01 128 aa29.55■■■□□ 2.32
PPP4R1-204ENST00000577393 YWHABP31946 246 aaKnown RBP29.55■■■□□ 2.32
PPP4R1-204ENST00000577393 NBR1Q14596 966 aa29.55■■■□□ 2.32
PPP4R1-204ENST00000577393 ZNF710Q8N1W2 664 aa29.55■■■□□ 2.32
PPP4R1-204ENST00000577393 ZNF579Q8NAF0 562 aaKnown RBP29.55■■■□□ 2.32
PPP4R1-204ENST00000577393 ARNTL2Q8WYA1 636 aa29.55■■■□□ 2.32
PPP4R1-204ENST00000577393 ZNF668Q96K58 619 aaPredicted RBP29.55■■■□□ 2.32
PPP4R1-204ENST00000577393 CEP170P1Q96L14 293 aa29.55■■■□□ 2.32
PPP4R1-204ENST00000577393 YME1L1Q96TA2 773 aa29.55■■■□□ 2.32
PPP4R1-204ENST00000577393 ST3GAL5Q9UNP4 418 aa29.55■■■□□ 2.32
PPP4R1-204ENST00000577393 EPOPA6NHQ4 379 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 POTEMA6NI47 508 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 RFXAPO00287 272 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 ZBTB39O15060 712 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 GPR182O15218 404 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 OR52Z1P0C646 297 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 TOB1P50616 345 aaPredicted RBP29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 GPC3P51654 580 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 ODR4Q5SWX8 454 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 MCTP1Q6DN14 999 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 OTUD6AQ7L8S5 288 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 FAM228AQ86W67 206 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 NEK9Q8TD19 979 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 SP7Q8TDD2 431 aaPredicted RBP29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 TSPYL2Q9H2G4 693 aaPredicted RBP29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 TTC3P53804 2025 aa29.54■■■□□ 2.32
PPP4R1-204ENST00000577393 IGFBP4P22692 258 aa29.53■■■□□ 2.32
PPP4R1-204ENST00000577393 DNM2P50570 870 aa29.53■■■□□ 2.32
PPP4R1-204ENST00000577393 CUL4AQ13619 759 aa29.53■■■□□ 2.32
PPP4R1-204ENST00000577393 JPH2Q9BR39 696 aaPredicted RBP29.53■■■□□ 2.32
PPP4R1-204ENST00000577393 PPME1Q9Y570 386 aa29.53■■■□□ 2.32
PPP4R1-204ENST00000577393 EYSQ5T1H1 3165 aa29.52■■■□□ 2.32
PPP4R1-204ENST00000577393 H3BQV1 296 aa29.52■■■□□ 2.32
PPP4R1-204ENST00000577393 TECP42680 631 aa29.52■■■□□ 2.32
PPP4R1-204ENST00000577393 C4orf32Q8N8J7 132 aa29.52■■■□□ 2.32
PPP4R1-204ENST00000577393 SCLT1Q96NL6 688 aa29.52■■■□□ 2.32
PPP4R1-204ENST00000577393 TGS1Q96RS0 853 aaKnown RBP29.52■■■□□ 2.32
PPP4R1-204ENST00000577393 SUCLA2Q9P2R7 463 aaPredicted RBP29.52■■■□□ 2.32
PPP4R1-204ENST00000577393 MGEA5O60502 916 aa29.51■■■□□ 2.31
PPP4R1-204ENST00000577393 LYPLA2O95372 231 aa29.51■■■□□ 2.31
PPP4R1-204ENST00000577393 EIF4BP23588 611 aaKnown RBP29.51■■■□□ 2.31
PPP4R1-204ENST00000577393 ERVK-21P61565 698 aa29.51■■■□□ 2.31
PPP4R1-204ENST00000577393 XKR9Q5GH70 373 aa29.51■■■□□ 2.31
PPP4R1-204ENST00000577393 FAM43BQ6ZT52 329 aaPredicted RBP29.51■■■□□ 2.31
PPP4R1-204ENST00000577393 NLRP7Q8WX94 980 aa29.51■■■□□ 2.31
PPP4R1-204ENST00000577393 SLC7A3Q8WY07 619 aa29.51■■■□□ 2.31
PPP4R1-204ENST00000577393 PCDHB6Q9Y5E3 794 aa29.51■■■□□ 2.31
PPP4R1-204ENST00000577393 RFC5P40937 340 aa29.5■■■□□ 2.31
PPP4R1-204ENST00000577393 POLGP54098 1239 aaPredicted RBP29.5■■■□□ 2.31
PPP4R1-204ENST00000577393 CDC42EP1Q00587 391 aa29.5■■■□□ 2.31
PPP4R1-204ENST00000577393 EXOC8Q8IYI6 725 aa29.5■■■□□ 2.31
PPP4R1-204ENST00000577393 ADAM2Q99965 735 aa29.5■■■□□ 2.31
PPP4R1-204ENST00000577393 DHX33Q9H6R0 707 aaKnown RBP29.5■■■□□ 2.31
PPP4R1-204ENST00000577393 MTUS1Q9ULD2 1270 aa29.5■■■□□ 2.31
PPP4R1-204ENST00000577393 DARSP14868 501 aaKnown RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms