RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ANAPC16Q96DE5 110 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 IER2Q9BTL4 223 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 GPR87Q9BY21 358 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 CD244Q9BZW8 370 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 EPN3Q9H201 632 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 TOR3AQ9H497 397 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 SYNPO2LQ9H987 977 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 STRIP2Q9ULQ0 834 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.53□□□□□ -2.16
COPB1-212ENST00000534771 COX11Q9Y6N1 276 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 A0A1W2PQU0 124 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 TCRBV5S4A2TA0A5A2 114 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 GOLGA8BA8MQT2 603 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 H2AFYO75367 372 aaKnown RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 ABHD16AO95870 558 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 PDIA4P13667 645 aaKnown RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 ZNF16P17020 682 aaPredicted RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 ZFP36P26651 326 aaKnown RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 ECE1P42892 770 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 STAT5BP51692 787 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 ADCY7P51828 1080 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 GPR85P60893 370 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 HERVK_113P62684 666 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 ATP2C1P98194 919 aaPredicted RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 ADAM15Q13444 863 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 HSP90AA2PQ14568 343 aaPredicted RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 ELAVL1Q15717 326 aaKnown RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 FXNQ16595 210 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 LCE3AQ5TA76 89 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 KANK2Q63ZY3 851 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 LARP1BQ659C4 914 aaKnown RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 TMEM200BQ69YZ2 307 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 GRAMD4Q6IC98 578 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 FAM111BQ6SJ93 734 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 ARHGAP36Q6ZRI8 547 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 RHOUQ7L0Q8 258 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 DPH6Q7L8W6 267 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 EEPD1Q7L9B9 569 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 MAMDC2Q7Z304 686 aaPredicted RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 OSTM1Q86WC4 334 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 THAP3Q8WTV1 239 aaPredicted RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 ATXN2LQ8WWM7 1075 aaKnown RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 SMG7Q92540 1137 aaKnown RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 MNTQ99583 582 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 ALG1Q9BT22 464 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 MLST8Q9BVC4 326 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 AMNQ9BXJ7 453 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 GZF1Q9H116 711 aaPredicted RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 OR10A5Q9H207 317 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 IPPKQ9H8X2 491 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 CYP4F11Q9HBI6 524 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 UCKL1Q9NWZ5 548 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 ACTR10Q9NZ32 417 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 EPB41L3Q9Y2J2 1087 aaPredicted RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 VWA7Q9Y334 891 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 CTDP1Q9Y5B0 961 aaPredicted RBP1.52□□□□□ -2.17
COPB1-212ENST00000534771 ATP23Q9Y6H3 246 aa1.52□□□□□ -2.17
COPB1-212ENST00000534771 UBE2QL1A1L167 161 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 SCAMP3O14828 347 aaKnown RBP1.51□□□□□ -2.17
COPB1-212ENST00000534771 SMAD7O15105 426 aaKnown RBP1.51□□□□□ -2.17
COPB1-212ENST00000534771 GSTA4O15217 222 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 RECQL4O94761 1208 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 LAG3P18627 525 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 AOAHP28039 575 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 STAT3P40763 770 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 CLK3P49761 638 aaKnown RBP1.51□□□□□ -2.17
COPB1-212ENST00000534771 USP14P54578 494 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 SESN2P58004 480 aaPredicted RBP1.51□□□□□ -2.17
COPB1-212ENST00000534771 SAFB2Q14151 953 aaKnown RBP eCLIP1.51□□□□□ -2.17
COPB1-212ENST00000534771 ACAP1Q15027 740 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 GPR19Q15760 415 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 TIGD2Q4W5G0 525 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 TNNI3KQ59H18 835 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 HECTD2Q5U5R9 776 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 NBPF6Q5VWK0 638 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 STYK1Q6J9G0 422 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 FBXO42Q6P3S6 717 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 KCNV1Q6PIU1 500 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 NSMFQ6X4W1 530 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 RD3Q7Z3Z2 195 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 SUPT20HQ8NEM7 779 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 PUM2Q8TB72 1066 aaKnown RBP eCLIP1.51□□□□□ -2.17
COPB1-212ENST00000534771 NELL1Q92832 810 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 GFM2Q969S9 779 aaKnown RBP1.51□□□□□ -2.17
COPB1-212ENST00000534771 RPL10LQ96L21 214 aaKnown RBP1.51□□□□□ -2.17
COPB1-212ENST00000534771 C16orf92Q96LL3 132 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 NBPF4Q96M43 638 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 PPP1R10Q96QC0 940 aaKnown RBP1.51□□□□□ -2.17
COPB1-212ENST00000534771 TCF25Q9BQ70 676 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 SLC6A15Q9H2J7 730 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 RSAD1Q9HA92 442 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 CATSPERZQ9NTU4 200 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 BTBD7Q9P203 1132 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 TRPS1Q9UHF7 1281 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 MRVI1Q9Y6F6 885 aa1.51□□□□□ -2.17
COPB1-212ENST00000534771 SPATA31A6Q5VVP1 1343 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 KLRG2A4D1S0 409 aaPredicted RBP1.5□□□□□ -2.17
COPB1-212ENST00000534771 GRID2IPA4D2P6 1211 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 PRAMEF25A6NGN4 478 aa1.5□□□□□ -2.17
COPB1-212ENST00000534771 B2RBV5 119 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms