RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 RBM5P52756 815 aaKnown RBP eCLIP21.22■□□□□ 0.992e-6■■□□□ 12.9
PCF11-203ENST00000530304 SUCLA2Q9P2R7 463 aaPredicted RBP21.22■□□□□ 0.99
PCF11-203ENST00000530304 INTUQ9ULD6 942 aa21.22■□□□□ 0.99
PCF11-203ENST00000530304 HMGB1P1B2RPK0 211 aaPredicted RBP21.21■□□□□ 0.99
PCF11-203ENST00000530304 NMT1P30419 496 aaKnown RBP21.21■□□□□ 0.99
PCF11-203ENST00000530304 CTTNQ14247 550 aaKnown RBP21.21■□□□□ 0.99
PCF11-203ENST00000530304 NT5DC3Q86UY8 548 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 RASGEF1CQ8N431 466 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 BHMG1C9JSJ3 638 aaPredicted RBP21.21■□□□□ 0.99
PCF11-203ENST00000530304 EVI5O60447 810 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 CPP00450 1065 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 ITGA4P13612 1032 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 GAP43P17677 238 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 STAT1P42224 750 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 ABCB5Q2M3G0 1257 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 ZC2HC1CQ53FD0 456 aaPredicted RBP21.21■□□□□ 0.99
PCF11-203ENST00000530304 SLC30A10Q6XR72 485 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 SYCE1Q8N0S2 351 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 MICALL1Q8N3F8 863 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 MYCT1Q8N699 235 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 IDI2Q9BXS1 227 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 NEUROG2Q9H2A3 272 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 TMBIM4Q9HC24 238 aa21.21■□□□□ 0.99
PCF11-203ENST00000530304 ZMYM2Q9UBW7 1377 aa21.2■□□□□ 0.99
PCF11-203ENST00000530304 CCDC188H7C350 402 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 CYP3A4P08684 503 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 PSMC2P35998 433 aaKnown RBP21.2■□□□□ 0.98
PCF11-203ENST00000530304 GALCP54803 685 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 ITGB3BPQ13352 177 aaPredicted RBP21.2■□□□□ 0.98
PCF11-203ENST00000530304 KCTD19Q17RG1 926 aaPredicted RBP21.2■□□□□ 0.98
PCF11-203ENST00000530304 FAM186BQ8IYM0 893 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 LNX1Q8TBB1 728 aaPredicted RBP21.2■□□□□ 0.98
PCF11-203ENST00000530304 HSD17B14Q9BPX1 270 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 EPN3Q9H201 632 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 AMACRQ9UHK6 382 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 EIF3DO15371 548 aaKnown RBP eCLIP21.2■□□□□ 0.98
PCF11-203ENST00000530304 FAM13AO94988 1023 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 BMP3P12645 472 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 NPEPPSP55786 919 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 LRIG3Q6UXM1 1119 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 TPH2Q8IWU9 490 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 SLC30A5Q8TAD4 765 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 HES6Q96HZ4 224 aa21.2■□□□□ 0.98
PCF11-203ENST00000530304 ANKRD31Q8N7Z5 1873 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 IGLV3-22A0A075B6J6 115 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 NPR1P16066 1061 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 UAP1Q16222 522 aaPredicted RBP21.19■□□□□ 0.98
PCF11-203ENST00000530304 LRRC45Q96CN5 670 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 EFCC1Q9HA90 598 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 GOLGA6L10A6NI86 522 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 H0YGN5 161 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 ZBTB39O15060 712 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 PPP1R37O75864 691 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 SLITRK3O94933 977 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 SOX5P35711 763 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 LIG3P49916 1009 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 SLC27A3Q5K4L6 730 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 C1orf186Q6ZWK4 172 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 B4GALNT4Q76KP1 1039 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 OTOP1Q7RTM1 612 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 PODNQ7Z5L7 613 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 KSR1Q8IVT5 923 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 OR2W6PQ8NHA6 318 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 OLIG1Q8TAK6 271 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 OSGEPQ9NPF4 335 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 NFS1Q9Y697 457 aa21.19■□□□□ 0.98
PCF11-203ENST00000530304 F8VZ95 297 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 MDH1P40925 334 aaKnown RBP21.18■□□□□ 0.98
PCF11-203ENST00000530304 COG2Q14746 738 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 SLC15A2Q16348 729 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 GLYCTKQ8IVS8 523 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 KCTD17Q8N5Z5 321 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 MRIQ9BWK5 157 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 CENPHQ9H3R5 247 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 GCOM1H8Y6P7 765 aaPredicted RBP21.18■□□□□ 0.98
PCF11-203ENST00000530304 PPP1R12BO60237 982 aaPredicted RBP21.18■□□□□ 0.98
PCF11-203ENST00000530304 MYZAPP0CAP1 466 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 ALDH1B1P30837 517 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 JAG1P78504 1218 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 DYDC2Q96IM9 177 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 STK33Q9BYT3 514 aa21.18■□□□□ 0.98
PCF11-203ENST00000530304 PIK3CDO00329 1044 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 DAPK3O43293 454 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 CHMP2AO43633 222 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 ERLIN2O94905 339 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 CTNNA1P35221 906 aaKnown RBP21.17■□□□□ 0.98
PCF11-203ENST00000530304 FLT3P36888 993 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 FMO5P49326 533 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 PTGISQ16647 500 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 SEPT12Q8IYM1 358 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 SLC35G2Q8TBE7 412 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 WDR18Q9BV38 432 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 TMX4Q9H1E5 349 aaPredicted RBP21.17■□□□□ 0.98
PCF11-203ENST00000530304 SLITRK6Q9H5Y7 841 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 PARVGQ9HBI0 331 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 TUFT1Q9NNX1 390 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 DNAJC12Q9UKB3 198 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 AMFRQ9UKV5 643 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 DRAP1Q14919 205 aaPredicted RBP21.17■□□□□ 0.98
PCF11-203ENST00000530304 NFIL3Q16649 462 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms