RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CPP00450 1065 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 UBAP2Q5T6F2 1119 aaKnown RBP21.3■■□□□ 1
CNEP1R1-203ENST00000458059 PPP1R18Q6NYC8 613 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 FRMD5Q7Z6J6 570 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 MREGQ8N565 214 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 ARHGEF26Q96DR7 871 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 RABGAP1Q9Y3P9 1069 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 ARFGEF1Q9Y6D6 1849 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 ZNF746Q6NUN9 644 aaPredicted RBP21.3■■□□□ 1
CNEP1R1-203ENST00000458059 ERMNQ8TAM6 284 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 CYFIP2Q96F07 1278 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 PBKQ96KB5 322 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 ERVK-5Q9HDB9 667 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 PLCB1Q9NQ66 1216 aa21.3■■□□□ 1
CNEP1R1-203ENST00000458059 KRT13P13646 458 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 USP8P40818 1118 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 DRAP1Q14919 205 aaPredicted RBP21.29■■□□□ 1
CNEP1R1-203ENST00000458059 NT5DC3Q86UY8 548 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 FAM186BQ8IYM0 893 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 SYT2Q8N9I0 419 aaPredicted RBP21.29■■□□□ 1
CNEP1R1-203ENST00000458059 ELMO3Q96BJ8 720 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 H0YGN5 161 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 FAM13AO94988 1023 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 GYS1P13807 737 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 CBWD6Q4V339 395 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 CBWD3Q5JTY5 395 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 CBWD5Q5RIA9 395 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 EIF2AK1Q9BQI3 630 aaKnown RBP21.29■■□□□ 1
CNEP1R1-203ENST00000458059 DNAJC12Q9UKB3 198 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 NFS1Q9Y697 457 aa21.29■■□□□ 1
CNEP1R1-203ENST00000458059 DDX39AO00148 427 aaKnown RBP21.28■■□□□ 1
CNEP1R1-203ENST00000458059 STAT1P42224 750 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 IFI16Q16666 785 aaKnown RBP21.28■■□□□ 1
CNEP1R1-203ENST00000458059 CERKLQ49MI3 558 aaPredicted RBP21.28■■□□□ 1
CNEP1R1-203ENST00000458059 SLFN12Q8IYM2 578 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 LENG9Q96B70 501 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 LRRC45Q96CN5 670 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 CD248Q9HCU0 757 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 AMFRQ9UKV5 643 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 TRAF3IP3Q9Y228 551 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 TGFB1I1O43294 461 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 CFBP00751 764 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 PLTPP55058 493 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 ACTRT1Q8TDG2 376 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 SNX24Q9Y343 169 aa21.28■■□□□ 1
CNEP1R1-203ENST00000458059 FRMD3A2A2Y4 597 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 TISP43B9A030 160 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 SHBGP04278 402 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 RPA1P27694 616 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 DCAF12L1Q5VU92 463 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 PPP4R3CPQ6ZMV5 832 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 THAP2Q9H0W7 228 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 TYW1Q9NV66 732 aaKnown RBP21.27■■□□□ 1
CNEP1R1-203ENST00000458059 F5H6K3 240 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 SLCO1A2P46721 670 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 ICA1Q05084 483 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 KLRC3Q07444 240 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 CUL1Q13616 776 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 APOBEC3HQ6NTF7 200 aaKnown RBP21.27■■□□□ 1
CNEP1R1-203ENST00000458059 BANK1Q8NDB2 785 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 PCIF1Q9H4Z3 704 aa21.27■■□□□ 1
CNEP1R1-203ENST00000458059 UTP11Q9Y3A2 253 aaKnown RBP21.27■■□□□ 1
CNEP1R1-203ENST00000458059 PDXKO00764 312 aa21.27■□□□□ 0.99
CNEP1R1-203ENST00000458059 DDR1Q08345 913 aa21.27■□□□□ 0.99
CNEP1R1-203ENST00000458059 C15orf52Q6ZUT6 534 aaKnown RBP21.27■□□□□ 0.99
CNEP1R1-203ENST00000458059 CD302Q8IX05 232 aa21.27■□□□□ 0.99
CNEP1R1-203ENST00000458059 DYDC2Q96IM9 177 aa21.27■□□□□ 0.99
CNEP1R1-203ENST00000458059 SELENOSQ9BQE4 189 aa21.27■□□□□ 0.99
CNEP1R1-203ENST00000458059 ACP6Q9NPH0 428 aa21.27■□□□□ 0.99
CNEP1R1-203ENST00000458059 PNMA2Q9UL42 364 aa21.27■□□□□ 0.99
CNEP1R1-203ENST00000458059 GOLGA6L7A0A1B0GV03 622 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 PPEF1O14829 653 aaPredicted RBP21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 ATMINO43313 823 aaPredicted RBP21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 FAM107AO95990 144 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 GUCY2CP25092 1073 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 MARCKSL1P49006 195 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 NBPF9Q3BBW0 867 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 TMC3Q7Z5M5 1100 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 FBXO11Q86XK2 927 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 JPH2Q9BR39 696 aaPredicted RBP21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 CCDC113Q9H0I3 377 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 PITPNM2Q9BZ72 1349 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 NRAPQ86VF7 1730 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 RPL13P26373 211 aaKnown RBP21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 RINT1Q6NUQ1 792 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 SLC20A1Q8WUM9 679 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 CTNNBL1Q8WYA6 563 aaPredicted RBP21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 AMNQ9BXJ7 453 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 DDX20Q9UHI6 824 aaKnown RBP21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 BZW2Q9Y6E2 419 aaKnown RBP21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 PLIN4Q96Q06 1357 aa21.26■□□□□ 0.99
CNEP1R1-203ENST00000458059 MCTP2Q6DN12 878 aa21.25■□□□□ 0.99
CNEP1R1-203ENST00000458059 EPM2AIP1Q7L775 607 aaPredicted RBP21.25■□□□□ 0.99
CNEP1R1-203ENST00000458059 CPNE8Q86YQ8 564 aa21.25■□□□□ 0.99
CNEP1R1-203ENST00000458059 RAPGEF5Q92565 580 aa21.25■□□□□ 0.99
CNEP1R1-203ENST00000458059 TEKT1Q969V4 418 aa21.25■□□□□ 0.99
CNEP1R1-203ENST00000458059 HOOK2Q96ED9 719 aa21.25■□□□□ 0.99
CNEP1R1-203ENST00000458059 SWAP70Q9UH65 585 aa21.25■□□□□ 0.99
CNEP1R1-203ENST00000458059 GMNCA6NCL1 334 aa21.25■□□□□ 0.99
CNEP1R1-203ENST00000458059 F8VZ95 297 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms