RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 GOPCQ9HD26 462 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 CNOT8Q9UFF9 292 aaKnown RBP15.66■□□□□ 0.1
ERCC3-202ENST00000426778 NOVA2Q9UNW9 492 aaKnown RBP15.66■□□□□ 0.1
ERCC3-202ENST00000426778 ATP8A1Q9Y2Q0 1164 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 RABGAP1Q9Y3P9 1069 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 GCOM1H8Y6P7 765 aaPredicted RBP15.66■□□□□ 0.1
ERCC3-202ENST00000426778 DDX39AO00148 427 aaKnown RBP15.66■□□□□ 0.1
ERCC3-202ENST00000426778 MYZAPP0CAP1 466 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 ICE2Q659A1 982 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 SH3BP5LQ7L8J4 393 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 NLRP14Q86W24 1093 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 TEKT1Q969V4 418 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 ERVK-5Q9HDB9 667 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 RPA1P27694 616 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 ZYXQ15942 572 aaKnown RBP15.65■□□□□ 0.1
ERCC3-202ENST00000426778 QPCTQ16769 361 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 KCNV1Q6PIU1 500 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 FRMD5Q7Z6J6 570 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 SLFN12Q8IYM2 578 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 SLC35G2Q8TBE7 412 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 MYCBPAPQ8TBZ2 947 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.65■□□□□ 0.12e-6■■□□□ 12.4
ERCC3-202ENST00000426778 EPN3Q9H201 632 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 TRAF3IP3Q9Y228 551 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 CALUO43852 315 aaPredicted RBP15.65■□□□□ 0.1
ERCC3-202ENST00000426778 KIAA0754O94854 1291 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 HSPA9P38646 679 aaKnown RBP15.65■□□□□ 0.1
ERCC3-202ENST00000426778 CRKP46108 304 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 DHX9Q08211 1270 aaKnown RBP15.65■□□□□ 0.1
ERCC3-202ENST00000426778 DRAP1Q14919 205 aaPredicted RBP15.65■□□□□ 0.1
ERCC3-202ENST00000426778 SPRED3Q2MJR0 410 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 ZNF746Q6NUN9 644 aaPredicted RBP15.65■□□□□ 0.1
ERCC3-202ENST00000426778 FBXO11Q86XK2 927 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 CERKQ8TCT0 537 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 RUBCNQ92622 972 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 DYDC2Q96IM9 177 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 TMBIM4Q9HC24 238 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 ACP6Q9NPH0 428 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 SWAP70Q9UH65 585 aa15.65■□□□□ 0.1
ERCC3-202ENST00000426778 OPLAHO14841 1288 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 FAM13AO94988 1023 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 NDUFB10O96000 172 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 DCAF12L1Q5VU92 463 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 RINT1Q6NUQ1 792 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 CCDC174Q6PII3 467 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 EPM2AIP1Q7L775 607 aaPredicted RBP15.64■□□□□ 0.09
ERCC3-202ENST00000426778 NT5DC3Q86UY8 548 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 FAM186BQ8IYM0 893 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 ERMNQ8TAM6 284 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 PCIF1Q9H4Z3 704 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 CPNE8Q86YQ8 564 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 AMNQ9BXJ7 453 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 TYW1Q9NV66 732 aaKnown RBP15.64■□□□□ 0.09
ERCC3-202ENST00000426778 WRAP73Q9P2S5 460 aaPredicted RBP15.64■□□□□ 0.09
ERCC3-202ENST00000426778 DNAJC12Q9UKB3 198 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 UBAP1LF5GYI3 381 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 H0YGN5 161 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 PDXKO00764 312 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 ZBTB48P10074 688 aaPredicted RBP15.64■□□□□ 0.09
ERCC3-202ENST00000426778 HNRNPH1P31943 449 aaKnown RBP15.64■□□□□ 0.09
ERCC3-202ENST00000426778 MAGOHP61326 146 aaKnown RBP15.64■□□□□ 0.09
ERCC3-202ENST00000426778 RRP1BQ14684 758 aaKnown RBP15.64■□□□□ 0.09
ERCC3-202ENST00000426778 KRT71Q3SY84 523 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 DHX37Q8IY37 1157 aaKnown RBP15.64■□□□□ 0.09
ERCC3-202ENST00000426778 MAGOHBQ96A72 148 aaKnown RBP15.64■□□□□ 0.09
ERCC3-202ENST00000426778 THAP2Q9H0W7 228 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 NFS1Q9Y697 457 aa15.64■□□□□ 0.09
ERCC3-202ENST00000426778 MYO3BQ8WXR4 1341 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 PITPNM2Q9BZ72 1349 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 TLDC2A0PJX2 215 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 GH2P01242 217 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 ECE1P42892 770 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 MARCKSL1P49006 195 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 PPP4R3CPQ6ZMV5 832 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 ZC3H3Q8IXZ2 948 aaKnown RBP15.63■□□□□ 0.09
ERCC3-202ENST00000426778 MREGQ8N565 214 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 ZSWIM2Q8NEG5 633 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 SLC20A1Q8WUM9 679 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 WDR18Q9BV38 432 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 COA1Q9GZY4 146 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 PLCB1Q9NQ66 1216 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 FAM198AQ9UFP1 575 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 VAV3Q9UKW4 847 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 ATMINO43313 823 aaPredicted RBP15.63■□□□□ 0.09
ERCC3-202ENST00000426778 SHBGP04278 402 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 USP8P40818 1118 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 STAT1P42224 750 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 MNAT1P51948 309 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 JAM2P57087 298 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 ACTRT1Q8TDG2 376 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 HOOK2Q96ED9 719 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 PBKQ96KB5 322 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 EFCC1Q9HA90 598 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 ZMYM2Q9UBW7 1377 aa15.63■□□□□ 0.09
ERCC3-202ENST00000426778 A0A1W2PRG0 241 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 PHF20L1A8MW92 1017 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 RGL2O15211 777 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 MEFVO15553 781 aaPredicted RBP15.62■□□□□ 0.09
ERCC3-202ENST00000426778 DLG4P78352 724 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 NBPF9Q3BBW0 867 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms