RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TRIM59Q8IWR1 403 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 SLC17A8Q8NDX2 589 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 AFAP1L1Q8TED9 768 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 TMEM174Q8WUU8 243 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 CCDC51Q96ER9 411 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 CEP170P1Q96L14 293 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 SH2D3AQ9BRG2 576 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 C17orf75Q9HAS0 396 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 ZNF302Q9NR11 478 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 CYP26B1Q9NR63 512 aa16.75■□□□□ 0.27
ACTB-204ENST00000425660 WDR81Q562E7 1941 aa16.74■□□□□ 0.27
ACTB-204ENST00000425660 DOCK5Q9H7D0 1870 aa16.74■□□□□ 0.27
ACTB-204ENST00000425660 ADGRA2Q96PE1 1338 aa16.74■□□□□ 0.27
ACTB-204ENST00000425660 MANSC4A6NHS7 340 aaPredicted RBP16.74■□□□□ 0.27
ACTB-204ENST00000425660 DGAT1O75907 488 aa16.74■□□□□ 0.27
ACTB-204ENST00000425660 GGPS1O95749 300 aa16.74■□□□□ 0.27
ACTB-204ENST00000425660 ATP4AP20648 1035 aa16.74■□□□□ 0.27
ACTB-204ENST00000425660 FECHP22830 423 aa16.74■□□□□ 0.27
ACTB-204ENST00000425660 RPL13P26373 211 aaKnown RBP16.74■□□□□ 0.27
ACTB-204ENST00000425660 FXR1P51114 621 aaKnown RBP eCLIP16.74■□□□□ 0.273e-14■■□□□ 11.8
ACTB-204ENST00000425660 ZNF157P51786 506 aaPredicted RBP16.74■□□□□ 0.27
ACTB-204ENST00000425660 GRB14Q14449 540 aa16.74■□□□□ 0.27
ACTB-204ENST00000425660 LY6KQ17RY6 165 aa16.74■□□□□ 0.27
ACTB-204ENST00000425660 EEPD1Q7L9B9 569 aa16.74■□□□□ 0.27
ACTB-204ENST00000425660 RETREG2Q8NC44 543 aa16.74■□□□□ 0.27
ACTB-204ENST00000425660 CASP14P31944 242 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 RTP1P59025 263 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 GOLGA8FQ08AF8 430 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 GOLGA8DPQ0D2H9 430 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 FIGNQ5HY92 759 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 CELF3Q5SZQ8 465 aaKnown RBP16.73■□□□□ 0.27
ACTB-204ENST00000425660 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 ARMCX2Q7L311 632 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 GPR142Q7Z601 462 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 MCPH1Q8NEM0 835 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 SEPT1Q8WYJ6 367 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 KIFAP3Q92845 792 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 PCYT2Q99447 389 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 BAG1Q99933 345 aaPredicted RBP16.73■□□□□ 0.27
ACTB-204ENST00000425660 NTPCRQ9BSD7 190 aaKnown RBP16.73■□□□□ 0.27
ACTB-204ENST00000425660 NIFKQ9BYG3 293 aaKnown RBP16.73■□□□□ 0.27
ACTB-204ENST00000425660 TTYH3Q9C0H2 523 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 DIS3Q9Y2L1 958 aaKnown RBP16.73■□□□□ 0.27
ACTB-204ENST00000425660 IVNS1ABPQ9Y6Y0 642 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 PES1O00541 588 aaKnown RBP16.73■□□□□ 0.27
ACTB-204ENST00000425660 SLC16A3O15427 465 aaKnown RBP16.73■□□□□ 0.27
ACTB-204ENST00000425660 ARHGAP6O43182 974 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 SORBS3O60504 671 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 NR3C1P04150 777 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 OATP04181 439 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 TPM1P09493 284 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 MAPK4P31152 587 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 NCKAP1LP55160 1127 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 GTF2BQ00403 316 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 RGMBQ6NW40 437 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 MAMDC4Q6UXC1 1216 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 MAEAQ7L5Y9 396 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 FRMD5Q7Z6J6 570 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 FBXO16Q8IX29 292 aaPredicted RBP16.73■□□□□ 0.27
ACTB-204ENST00000425660 GOLGA5Q8TBA6 731 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 IQCDQ96DY2 449 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 NUP58Q9BVL2 599 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 GBP3Q9H0R5 595 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 GPRC5CQ9NQ84 441 aa16.73■□□□□ 0.27
ACTB-204ENST00000425660 SEPT9Q9UHD8 586 aaPredicted RBP16.73■□□□□ 0.27
ACTB-204ENST00000425660 ZNFX1Q9P2E3 1918 aaKnown RBP16.72■□□□□ 0.27
ACTB-204ENST00000425660 K7ENM7 598 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 IGF2BP3O00425 579 aaKnown RBP eCLIP16.72■□□□□ 0.275e-9■■■■□ 20.1
ACTB-204ENST00000425660 MYBPC2Q14324 1141 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 SYCP1Q15431 976 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 CCDC40Q4G0X9 1142 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 HS2ST1Q7LGA3 356 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 TRMT1LQ7Z2T5 733 aaKnown RBP16.72■□□□□ 0.27
ACTB-204ENST00000425660 SLC9A9Q8IVB4 645 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 SCFD2Q8WU76 684 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 SPIRE2Q8WWL2 714 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 CEP89Q96ST8 783 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 GPR20Q99678 358 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 NAA15Q9BXJ9 866 aaKnown RBP16.72■□□□□ 0.27
ACTB-204ENST00000425660 TMEM206Q9H813 350 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 MLXIPQ9HAP2 919 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 XPNPEP1Q9NQW7 623 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 DMAC2Q9NW81 257 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 FAM184BQ9ULE4 1060 aa16.72■□□□□ 0.27
ACTB-204ENST00000425660 PLXNB2O15031 1838 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 RASSF10A6NK89 507 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 AKAP3O75969 853 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 TCF7P36402 384 aaPredicted RBP16.71■□□□□ 0.27
ACTB-204ENST00000425660 TTLL4Q14679 1199 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 FAM102BQ5T8I3 360 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 E4F1Q66K89 784 aaPredicted RBP16.71■□□□□ 0.27
ACTB-204ENST00000425660 KCNN1Q92952 543 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 MKNK1Q9BUB5 465 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 VTA1Q9NP79 307 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 AGPAT3Q9NRZ7 376 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 ABHD10Q9NUJ1 306 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 CAPN11Q9UMQ6 739 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 SIK3Q9Y2K2 1263 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 ARID2Q68CP9 1835 aa16.71■□□□□ 0.27
ACTB-204ENST00000425660 RBM47A0AV96 593 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms