RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 PRKCIP41743 596 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 SNAP25P60880 206 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 C2orf54Q08AI8 447 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 PPP2R5AQ15172 486 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 CEP55Q53EZ4 464 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 DCAF17Q5H9S7 520 aaPredicted RBP13.37□□□□□ -0.27
UBR4-203ENST00000375225 NOL9Q5SY16 702 aaKnown RBP13.37□□□□□ -0.27
UBR4-203ENST00000375225 KLHDC7AQ5VTJ3 777 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 RINT1Q6NUQ1 792 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 C8orf74Q6P047 294 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 NIPA1Q7RTP0 329 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 PNMA8AQ86V59 439 aaPredicted RBP13.37□□□□□ -0.27
UBR4-203ENST00000375225 TPH2Q8IWU9 490 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 SYCE1Q8N0S2 351 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 SPATA4Q8NEY3 305 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 COG1Q8WTW3 980 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 KLRG1Q96E93 195 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 PKNOX2Q96KN3 472 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 DRC1Q96MC2 740 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 ZNF577Q9BSK1 485 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 VPS18Q9P253 973 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 ZHX1Q9UKY1 873 aaPredicted RBP13.37□□□□□ -0.27
UBR4-203ENST00000375225 TFR2Q9UP52 801 aa13.37□□□□□ -0.27
UBR4-203ENST00000375225 FRMPD4Q14CM0 1322 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 IGLV3-22A0A075B6J6 115 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 ARHGEF35A5YM69 484 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 ADM5C9JUS6 153 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 SOCS7O14512 581 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 PSMD10O75832 226 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 PRPF6O94906 941 aaKnown RBP13.36□□□□□ -0.27
UBR4-203ENST00000375225 MYBP10242 640 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 UCHL3P15374 230 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 STAT1P42224 750 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 EPHB4P54760 987 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 PSMC6P62333 389 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 TNNC1P63316 161 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 CYP4A11Q02928 519 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 CETN1Q12798 172 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 NNTQ13423 1086 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 KIAA0753Q2KHM9 967 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 EMBQ6PCB8 327 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 IFT20Q8IY31 132 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 FAM186BQ8IYM0 893 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 FAM133AQ8N9E0 248 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 SLC17A8Q8NDX2 589 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBR4-203ENST00000375225 PBKQ96KB5 322 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 RUFY1Q96T51 708 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 HSD17B14Q9BPX1 270 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 WDR18Q9BV38 432 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 TIPINQ9BVW5 301 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 FGFBP2Q9BYJ0 223 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 TAF1DQ9H5J8 278 aaPredicted RBP13.36□□□□□ -0.27
UBR4-203ENST00000375225 TCEAL9Q9UHQ7 104 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 ADAM21Q9UKJ8 722 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 PCDHGC5Q9Y5F6 944 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 PHIPQ8WWQ0 1821 aa13.36□□□□□ -0.27
UBR4-203ENST00000375225 OTOFQ9HC10 1997 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 A0A0A6YYK5 440 aaPredicted RBP13.35□□□□□ -0.27
UBR4-203ENST00000375225 ZNF185O15231 689 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 OPA1O60313 960 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 N4BP1O75113 896 aaKnown RBP13.35□□□□□ -0.27
UBR4-203ENST00000375225 IVLP07476 585 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 MAPTP10636 758 aaKnown RBP13.35□□□□□ -0.27
UBR4-203ENST00000375225 BCRP11274 1271 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 PTPRAP18433 802 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 GUCY2CP25092 1073 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 IREB2P48200 963 aaKnown RBP13.35□□□□□ -0.27
UBR4-203ENST00000375225 CLUL1Q15846 466 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 EAPPQ56P03 285 aaPredicted RBP13.35□□□□□ -0.27
UBR4-203ENST00000375225 C1orf186Q6ZWK4 172 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 FAM178BQ8IXR5 827 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 ZNF280CQ8ND82 737 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 ZKSCAN4Q969J2 545 aaPredicted RBP13.35□□□□□ -0.27
UBR4-203ENST00000375225 DYDC2Q96IM9 177 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 RUSC1Q9BVN2 902 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
UBR4-203ENST00000375225 TMEM206Q9H813 350 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 STIM2Q9P246 746 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 ASTN1O14525 1302 aa13.35□□□□□ -0.27
UBR4-203ENST00000375225 PAPPA2Q9BXP8 1791 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 DCAF8L1A6NGE4 600 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 A6NNZ2 444 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 OPLAHO14841 1288 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 BUB1O43683 1085 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 TLR2O60603 784 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 PALMO75781 387 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 SLITRK3O94933 977 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 KRT13P13646 458 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 ERCC3P19447 782 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 PON1P27169 355 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 CASP5P51878 434 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 SNRPFP62306 86 aaKnown RBP13.34□□□□□ -0.27
UBR4-203ENST00000375225 APBA1Q02410 837 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 MTMR2Q13614 643 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 RPS6KA1Q15418 735 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 TUBB8Q3ZCM7 444 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 KIAA1755Q5JYT7 1200 aa13.34□□□□□ -0.27
UBR4-203ENST00000375225 NFRKBQ6P4R8 1299 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms