RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CCDC87Q9NVE4 849 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 LGR5O75473 907 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 CYP7A1P22680 504 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 PLTPP55058 493 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 CHRNDQ07001 517 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 MGAT5Q09328 741 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 OR52E8Q6IFG1 317 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 BLIDQ8IZY5 108 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 RAB3IPQ96QF0 476 aaPredicted RBP22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 CYP39A1Q9NYL5 469 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 NHSL1Q5SYE7 1610 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 ABCB11O95342 1321 aa22.28■■□□□ 1.16
TMEFF1-201ENST00000374879 KLRC3Q07444 240 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 CMPK2Q5EBM0 449 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 FOXB2Q5VYV0 432 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 LRRC55Q6ZSA7 311 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 ADGRA1Q86SQ6 560 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 ATL2Q8NHH9 583 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 UCMAQ8WVF2 138 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 SEMA4AQ9H3S1 761 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 ABCF2Q9UG63 623 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 PRKAG3Q9UGI9 489 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 BTNL10A8MVZ5 291 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 E7ENQ6 273 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 O00370 1275 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 COQ9O75208 318 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 UNC5CO95185 931 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 COPB2P35606 906 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 CRKLP46109 303 aaKnown RBP22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 TXNRD1Q16881 649 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 COBLL1Q53SF7 1204 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 PEX26Q7Z412 305 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 DDX23Q9BUQ8 820 aaKnown RBP22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 UBE2OQ9C0C9 1292 aaKnown RBP22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 CUEDC2Q9H467 287 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 MLXIPLQ9NP71 852 aa22.27■■□□□ 1.16
TMEFF1-201ENST00000374879 ACADSP16219 412 aa22.27■■□□□ 1.15
TMEFF1-201ENST00000374879 DUPD1Q68J44 220 aa22.27■■□□□ 1.15
TMEFF1-201ENST00000374879 APBB1IPQ7Z5R6 666 aaPredicted RBP22.27■■□□□ 1.15
TMEFF1-201ENST00000374879 TPCN2Q8NHX9 752 aa22.27■■□□□ 1.15
TMEFF1-201ENST00000374879 DNAJC9Q8WXX5 260 aa22.27■■□□□ 1.15
TMEFF1-201ENST00000374879 BICD1Q96G01 975 aa22.27■■□□□ 1.15
TMEFF1-201ENST00000374879 H0Y3Z8 333 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 FGFR1OPO95684 399 aaKnown RBP22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 PTDSS1P48651 473 aaKnown RBP22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 GNAQP50148 359 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 PFKFB3Q16875 520 aaPredicted RBP22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 HHATQ5VTY9 493 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 IFT43Q96FT9 208 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 NIP7Q9Y221 180 aaKnown RBP eCLIP22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 BCORQ6W2J9 1755 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 PARP10Q53GL7 1025 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 ARHGAP27Q6ZUM4 889 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 ADAT2Q7Z6V5 191 aaKnown RBP22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 EXOC3L1Q86VI1 746 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 FBXO25Q8TCJ0 367 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 ASAP3Q8TDY4 903 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 GLG1Q92896 1179 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 NUDCD1Q96RS6 583 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 KANSL2Q9H9L4 492 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 MAGEF1Q9HAY2 307 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 SNX24Q9Y343 169 aa22.26■■□□□ 1.15
TMEFF1-201ENST00000374879 RPTORQ8N122 1335 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 SMAPO00193 183 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 CAMTA2O94983 1202 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 FGGP02679 453 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 AUHQ13825 339 aaKnown RBP22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 ASIC2Q16515 512 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 SOGA3Q5TF21 947 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 SUPT20HQ8NEM7 779 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 FGD4Q96M96 766 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 ERP44Q9BS26 406 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 STRCQ7RTU9 1775 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 CREB1P16220 341 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 SKIV2L2P42285 1042 aaKnown RBP22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 PTK2Q05397 1052 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 INF2Q27J81 1249 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 TNFAIP8L3Q5GJ75 292 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 GPKOWQ92917 476 aaPredicted RBP eCLIP22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 FAM136AQ96C01 138 aa22.25■■□□□ 1.15
TMEFF1-201ENST00000374879 NTSR2O95665 410 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 CALM1P0DP23 149 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 CALM2P0DP24 149 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 CALM3P0DP25 149 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 DR1Q01658 176 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 ZDHHC24Q6UX98 284 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 VCXQ9H320 206 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 AIPL1Q9NZN9 384 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 STXBP5LQ9Y2K9 1186 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 DAAM1Q9Y4D1 1078 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 TSNAXIP1Q2TAA8 658 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 TAOK1Q7L7X3 1001 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 OTUD6AQ7L8S5 288 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 FAM13CQ8NE31 585 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 GLIS3Q8NEA6 775 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 TCP11L1Q9NUJ3 509 aa22.24■■□□□ 1.15
TMEFF1-201ENST00000374879 MAGEB6P1A0A0J9YX57 407 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 CCDC194A0A1B0GVG4 234 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms