RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PPP1R37O75864 691 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 MAGEA1P43355 309 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 PSMC5P62195 406 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 KCNA1Q09470 495 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 ASIC2Q16515 512 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 DCAF17Q5H9S7 520 aaPredicted RBP20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 TCERG1LQ5VWI1 586 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 TRAPPC11Q7Z392 1133 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 TRIM58Q8NG06 486 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 SLC35C1Q96A29 364 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 SENP7Q9BQF6 1050 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 BCAS3Q9H6U6 928 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 ANKEF1Q9NU02 776 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 HOXC10Q9NYD6 342 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 PTPRFP10586 1907 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 SSC5DA1L4H1 1573 aa20.05■□□□□ 0.8
PDLIM7-203ENST00000359895 CTAGE15A4D2H0 777 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 CTAGE8P0CG41 777 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 CASP4P49662 377 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 RARRES1P49788 294 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 RAPGEF1Q13905 1077 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 PRAMEF18Q5VWM3 479 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 ZNF746Q6NUN9 644 aaPredicted RBP20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 CTAGE6Q86UF2 777 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 VSIG10LQ86VR7 867 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 SLC9A9Q8IVB4 645 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 CTAGE4Q8IX94 777 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 DAW1Q8N136 415 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 SLC17A8Q8NDX2 589 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 NSUN6Q8TEA1 469 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 BORCS6Q96GS4 357 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 WNK4Q96J92 1243 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 TEX13BQ9BXU2 312 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 TMEM206Q9H813 350 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 DMAC2Q9NW81 257 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 OGFRQ9NZT2 677 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 DDX41Q9UJV9 622 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 ZNF214Q9UL59 606 aaPredicted RBP20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 FRMD4BQ9Y2L6 1034 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 RIPK3Q9Y572 518 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 BZW2Q9Y6E2 419 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 ARID2Q68CP9 1835 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 MYH10P35580 1976 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 TESPA1A2RU30 521 aaPredicted RBP20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 GRIN3BO60391 1043 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 STAM2O75886 525 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 NR3C2P08235 984 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 PON1P27169 355 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 YWHABP31946 246 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 SH3D19Q5HYK7 790 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 KLHDC7AQ5VTJ3 777 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 SYCP3Q8IZU3 236 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 RBM46Q8TBY0 533 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 DRC1Q96MC2 740 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 ACAD9Q9H845 621 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 AGPAT3Q9NRZ7 376 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 TFR2Q9UP52 801 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 AFG3L2Q9Y4W6 797 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 SAR1BQ9Y6B6 198 aa20.04■□□□□ 0.8
PDLIM7-203ENST00000359895 K7ENM7 598 aa20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 TLR2O60603 784 aa20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 DKC1O60832 514 aaKnown RBP eCLIP20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 PLS3P13797 630 aa20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 CLCN6P51797 869 aa20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 SNRPFP62306 86 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 PPP2R5AQ15172 486 aa20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 DPY19L2P1Q6NXN4 242 aa20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 TMCO3Q6UWJ1 677 aa20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.03■□□□□ 0.82e-7■■□□□ 11.8
PDLIM7-203ENST00000359895 TMEM174Q8WUU8 243 aa20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 CDHR1Q96JP9 859 aa20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 PUF60Q9UHX1 559 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 DAAM1Q9Y4D1 1078 aa20.03■□□□□ 0.8
PDLIM7-203ENST00000359895 PAPPA2Q9BXP8 1791 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 MACROD2A1Z1Q3 448 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 UCHL3P15374 230 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 SLC9A1P19634 815 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 ANXA13P27216 316 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 HIRAP54198 1017 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 CKAP4Q07065 602 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 KLHL30Q0D2K2 578 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 TMEM132BQ14DG7 1078 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 RNF10Q8N5U6 811 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 RPGRIP1Q96KN7 1286 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 INPP4AQ96PE3 977 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 ALS2CR12Q96Q35 445 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 ACCSQ96QU6 501 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 SPAG5Q96R06 1193 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 IWS1Q96ST2 819 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 MOV10L1Q9BXT6 1211 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 ST6GALNAC4Q9H4F1 302 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 JRKLQ9Y4A0 524 aa20.02■□□□□ 0.8
PDLIM7-203ENST00000359895 NFASCO94856 1347 aa20.01■□□□□ 0.79
PDLIM7-203ENST00000359895 ATP9AO75110 1047 aa20.01■□□□□ 0.79
PDLIM7-203ENST00000359895 ATP1A1P05023 1023 aaKnown RBP20.01■□□□□ 0.79
PDLIM7-203ENST00000359895 SLC18A3Q16572 532 aa20.01■□□□□ 0.79
PDLIM7-203ENST00000359895 C10orf76Q5T2E6 689 aa20.01■□□□□ 0.79
PDLIM7-203ENST00000359895 C12orf56Q8IXR9 622 aa20.01■□□□□ 0.79
PDLIM7-203ENST00000359895 SMAP1Q8IYB5 467 aaPredicted RBP20.01■□□□□ 0.79
PDLIM7-203ENST00000359895 LCTP09848 1927 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms