RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 DYNC1I2Q13409 638 aaKnown RBP17.54■□□□□ 0.4
MBD1-204ENST00000347968 LLGL1Q15334 1064 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 DIXDC1Q155Q3 683 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 IFNL3Q8IZI9 196 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 GLIS3Q8NEA6 775 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 FAM136AQ96C01 138 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 TRIM7Q9C029 511 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 MINDY4BA8MYZ0 360 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 FGGP02679 453 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 NLRP5P59047 1200 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 NPY5RQ15761 445 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 CNPY1Q3B7I2 92 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 PABPC1LQ4VXU2 614 aaKnown RBP17.54■□□□□ 0.4
MBD1-204ENST00000347968 CGB2Q6NT52 195 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 TMEM60Q9H2L4 133 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 KHDC1Q4VXA5 237 aaKnown RBP17.53■□□□□ 0.4
MBD1-204ENST00000347968 SFMBT2Q5VUG0 894 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 OLFML2BQ68BL8 750 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 ZSCAN29Q8IWY8 852 aaPredicted RBP17.53■□□□□ 0.4
MBD1-204ENST00000347968 KIAA1683Q9H0B3 1180 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 EXOC3L1Q86VI1 746 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 NRG4Q8WWG1 115 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 SCG3Q8WXD2 468 aaKnown RBP17.53■□□□□ 0.4
MBD1-204ENST00000347968 DNAJC1Q96KC8 554 aaKnown RBP17.53■□□□□ 0.4
MBD1-204ENST00000347968 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.53■□□□□ 0.47e-7■■□□□ 13.3
MBD1-204ENST00000347968 LSM14BQ9BX40 385 aaKnown RBP17.53■□□□□ 0.4
MBD1-204ENST00000347968 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.53■□□□□ 0.46e-7■■■■□ 23.3
MBD1-204ENST00000347968 CARD9Q9H257 536 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 PARP4Q9UKK3 1724 aaKnown RBP17.53■□□□□ 0.4
MBD1-204ENST00000347968 CCDC169A6NNP5 214 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 RHOBTB3O94955 611 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 ACADSP16219 412 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 MPP3Q13368 585 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 NKX1-1Q15270 411 aaPredicted RBP17.53■□□□□ 0.4
MBD1-204ENST00000347968 FIGNQ5HY92 759 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 ZNF333Q96JL9 665 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 TBC1D10AQ9BXI6 508 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 KLHL14Q9P2G3 628 aa17.53■□□□□ 0.4
MBD1-204ENST00000347968 BZW2Q9Y6E2 419 aaKnown RBP17.53■□□□□ 0.4
MBD1-204ENST00000347968 PDE6AP16499 860 aa17.52■□□□□ 0.4
MBD1-204ENST00000347968 MPP2Q14168 576 aa17.52■□□□□ 0.4
MBD1-204ENST00000347968 AADACL2Q6P093 401 aa17.52■□□□□ 0.4
MBD1-204ENST00000347968 INTS8Q75QN2 995 aaKnown RBP17.52■□□□□ 0.4
MBD1-204ENST00000347968 DYMQ7RTS9 669 aa17.52■□□□□ 0.4
MBD1-204ENST00000347968 FAM114A1Q8IWE2 563 aa17.52■□□□□ 0.4
MBD1-204ENST00000347968 DNAJC10Q8IXB1 793 aa17.52■□□□□ 0.4
MBD1-204ENST00000347968 MIGA1Q8NAN2 632 aa17.52■□□□□ 0.4
MBD1-204ENST00000347968 LRRC8CQ8TDW0 803 aa17.52■□□□□ 0.4
MBD1-204ENST00000347968 SPOCK2Q92563 424 aa17.52■□□□□ 0.4
MBD1-204ENST00000347968 RAB3IPQ96QF0 476 aaPredicted RBP17.52■□□□□ 0.4
MBD1-204ENST00000347968 PABPC3Q9H361 631 aaKnown RBP17.52■□□□□ 0.4
MBD1-204ENST00000347968 ERVK-5Q9HDB9 667 aa17.52■□□□□ 0.4
MBD1-204ENST00000347968 TBK1Q9UHD2 729 aa17.52■□□□□ 0.4
MBD1-204ENST00000347968 PCCAP05165 728 aaPredicted RBP17.52■□□□□ 0.39
MBD1-204ENST00000347968 KLHL30Q0D2K2 578 aa17.52■□□□□ 0.39
MBD1-204ENST00000347968 RCN1Q15293 331 aa17.52■□□□□ 0.39
MBD1-204ENST00000347968 FAM83BQ5T0W9 1011 aa17.52■□□□□ 0.39
MBD1-204ENST00000347968 SNX30Q5VWJ9 437 aa17.52■□□□□ 0.39
MBD1-204ENST00000347968 BARGINQ6ZT62 677 aa17.52■□□□□ 0.39
MBD1-204ENST00000347968 PEX26Q7Z412 305 aa17.52■□□□□ 0.39
MBD1-204ENST00000347968 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.52■□□□□ 0.39
MBD1-204ENST00000347968 KIAA0895Q8NCT3 520 aa17.52■□□□□ 0.39
MBD1-204ENST00000347968 DHTKD1Q96HY7 919 aaPredicted RBP17.52■□□□□ 0.39
MBD1-204ENST00000347968 TGS1Q96RS0 853 aaKnown RBP17.52■□□□□ 0.39
MBD1-204ENST00000347968 STRBPQ96SI9 672 aaKnown RBP17.52■□□□□ 0.39
MBD1-204ENST00000347968 ATXN10Q9UBB4 475 aa17.52■□□□□ 0.39
MBD1-204ENST00000347968 KRT36O76013 467 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 EIF3BP55884 814 aaKnown RBP17.51■□□□□ 0.39
MBD1-204ENST00000347968 DDB1Q16531 1140 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 EAPPQ56P03 285 aaPredicted RBP17.51■□□□□ 0.39
MBD1-204ENST00000347968 ISLR2Q6UXK2 745 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 CEP128Q6ZU80 1094 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 PTF1AQ7RTS3 328 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 RBBP8NLQ8NC74 664 aaPredicted RBP17.51■□□□□ 0.39
MBD1-204ENST00000347968 MMTAG2Q9BU76 263 aaKnown RBP17.51■□□□□ 0.39
MBD1-204ENST00000347968 DMAP1Q9NPF5 467 aaPredicted RBP17.51■□□□□ 0.39
MBD1-204ENST00000347968 SNAP23O00161 211 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 RASGRF2O14827 1237 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 ACSL3O95573 720 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 PLCG1P19174 1290 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 USP11P51784 963 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 MFSD4BQ5TF39 518 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 IRGCQ6NXR0 463 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 GBP7Q8N8V2 638 aaPredicted RBP17.51■□□□□ 0.39
MBD1-204ENST00000347968 CCDC97Q96F63 343 aaPredicted RBP17.51■□□□□ 0.39
MBD1-204ENST00000347968 MTMR7Q9Y216 660 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 BICDL2A1A5D9 508 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 KRT13P13646 458 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 NEK3P51956 506 aa17.51■□□□□ 0.39
MBD1-204ENST00000347968 AUHQ13825 339 aaKnown RBP17.51■□□□□ 0.39
MBD1-204ENST00000347968 TNKSO95271 1327 aa17.5■□□□□ 0.39
MBD1-204ENST00000347968 A6NJR5 290 aa17.5■□□□□ 0.39
MBD1-204ENST00000347968 ARHGEF2Q92974 986 aaKnown RBP17.5■□□□□ 0.39
MBD1-204ENST00000347968 PGM2Q96G03 612 aa17.5■□□□□ 0.39
MBD1-204ENST00000347968 TJP3O95049 919 aa17.5■□□□□ 0.39
MBD1-204ENST00000347968 GJB6O95452 261 aa17.5■□□□□ 0.39
MBD1-204ENST00000347968 Q4G0T1 1027 aa17.5■□□□□ 0.39
MBD1-204ENST00000347968 MAGEB6Q8N7X4 407 aa17.5■□□□□ 0.39
MBD1-204ENST00000347968 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms