RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ADCK2Q7Z695 626 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 CLRN2A0PK11 232 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 SAAL1Q96ER3 474 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 H2AFY2Q9P0M6 372 aaPredicted RBP17.51■□□□□ 0.39
PTCH1-201ENST00000331920 MMEP08473 750 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 TRIM71Q2Q1W2 868 aaKnown RBP17.51■□□□□ 0.39
PTCH1-201ENST00000331920 CHGBP05060 677 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 ARL4DP49703 201 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 NSD2O96028 1365 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 MROH5Q6ZUA9 1318 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 KCNA2P16389 499 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 COBLL1Q53SF7 1204 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 CCDC157Q569K6 752 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 C11orf96Q7Z7L8 435 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 PDIK1LQ8N165 341 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTCH1-201ENST00000331920 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.5■□□□□ 0.393e-6■■■■■ 50.8
PTCH1-201ENST00000331920 ACTR5Q9H9F9 607 aaPredicted RBP17.5■□□□□ 0.39
PTCH1-201ENST00000331920 GOLGA8IPA6NC78 632 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 GOLGA8JA6NMD2 632 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 GOLGA8RI6L899 631 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 NME3Q13232 169 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 ME3Q16798 604 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTCH1-201ENST00000331920 PARVGQ9HBI0 331 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 DYRK4Q9NR20 520 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 STK17AQ9UEE5 414 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 TTC7AQ9ULT0 858 aaPredicted RBP17.5■□□□□ 0.39
PTCH1-201ENST00000331920 C5orf58C9J3I9 102 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 PLBD2Q8NHP8 589 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 TMEM60Q9H2L4 133 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 RNMTO43148 476 aaKnown RBP17.5■□□□□ 0.39
PTCH1-201ENST00000331920 ATXN3P54252 364 aaPredicted RBP17.5■□□□□ 0.39
PTCH1-201ENST00000331920 ABCB5Q2M3G0 1257 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 DDX53Q86TM3 631 aaKnown RBP17.5■□□□□ 0.39
PTCH1-201ENST00000331920 THEM5Q8N1Q8 247 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 MRPS26Q9BYN8 205 aaKnown RBP17.5■□□□□ 0.39
PTCH1-201ENST00000331920 TJP3O95049 919 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 CAPN1P07384 714 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 SMARCA1P28370 1054 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 C16orf62Q7Z3J2 963 aa17.5■□□□□ 0.39
PTCH1-201ENST00000331920 MFN1Q8IWA4 741 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 SCG3Q8WXD2 468 aaKnown RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 OSBPL1AQ9BXW6 950 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 TRIP4Q15650 581 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 FAM98CQ17RN3 349 aaKnown RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 METTL22Q9BUU2 404 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 RPAP3Q9H6T3 665 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 DOLKQ9UPQ8 538 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 APBA3O96018 575 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 SSTR3P32745 418 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 PPP2R5BQ15173 497 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 SOWAHDA6NJG2 315 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 SNAP25P60880 206 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 CNGA3Q16281 694 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 PARP10Q53GL7 1025 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 ALFQ53S48 1182 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 APPL2Q8NEU8 664 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 GTF2A1LQ9UNN4 478 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 LRRC36Q1X8D7 754 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 SLC44A4Q53GD3 710 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 SPATA1Q5VX52 437 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 OLFML2BQ68BL8 750 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 FHDC1Q9C0D6 1143 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 RERGLQ9H628 205 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 ZNF556Q9HAH1 456 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 SPTLC3Q9NUV7 552 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 FARP1Q9Y4F1 1045 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 CC2D2AQ9P2K1 1620 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 NDUFB5O43674 189 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 GTPBP6O43824 516 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 FASTKD1Q53R41 847 aaKnown RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 DCAF5Q96JK2 942 aa17.49■□□□□ 0.39
PTCH1-201ENST00000331920 LBHD1Q9BQE6 289 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 FAM49AQ9H0Q0 323 aaPredicted RBP17.49■□□□□ 0.39
PTCH1-201ENST00000331920 UBE4BO95155 1302 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 RAB14P61106 215 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 GUCY1A3Q02108 690 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 DYTNA2CJ06 578 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 KPNA7A9QM74 516 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 RPS6P62753 249 aaKnown RBP17.48■□□□□ 0.39
PTCH1-201ENST00000331920 NFU1Q9UMS0 254 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 ANKRD36BQ8N2N9 1353 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 ANO5Q75V66 913 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 BZW1Q7L1Q6 419 aaKnown RBP17.48■□□□□ 0.39
PTCH1-201ENST00000331920 LUZP2Q86TE4 346 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 SP110Q9HB58 689 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 MRPL40Q9NQ50 206 aaKnown RBP17.48■□□□□ 0.39
PTCH1-201ENST00000331920 DFFAO00273 331 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 PRKCQQ04759 706 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 NEK9Q8TD19 979 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 DEPDC7Q96QD5 511 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 SOX13Q9UN79 622 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 ZMYM6O95789 1325 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 NFIBO00712 420 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 ASMTLO95671 621 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 ERICH1Q86X53 443 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 COG1Q8WTW3 980 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 SMARCAD1Q9H4L7 1026 aa17.48■□□□□ 0.39
PTCH1-201ENST00000331920 NHEJ1Q9H9Q4 299 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms