RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ATP6V1E1P36543 226 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 MAGEA9P43362 315 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 MECOMQ03112 1051 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 BBS5Q8N3I7 341 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 EDC4Q6P2E9 1401 aaKnown RBP17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 ADD2P35612 726 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 OCA2Q04671 838 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 APOBEC2Q9Y235 224 aaKnown RBP17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 CUL7Q14999 1698 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 KDM1AO60341 852 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 GJC2Q5T442 439 aaPredicted RBP17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 C1orf228Q6PIY5 440 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 LRFN2Q9ULH4 789 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 ARHGAP26Q9UNA1 814 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 FBXW4P57775 412 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 CC2D1AQ6P1N0 951 aaPredicted RBP17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 ANKMY2Q8IV38 441 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 OXER1Q8TDS5 423 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 RNF26Q9BY78 433 aaPredicted RBP17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 USP21Q9UK80 565 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 NUP160Q12769 1436 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 RNF103-CHMP3A0A140T963 221 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 H0YCG3 227 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 KIAA1841Q6NSI8 718 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 C1orf54Q8WWF1 131 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 DCPSQ96C86 337 aaKnown RBP17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 TRIM11Q96F44 468 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 MS4A14Q96JA4 679 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 ABHD10Q9NUJ1 306 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 KLHL8Q9P2G9 620 aaPredicted RBP17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 TTI1O43156 1089 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 MED7O43513 233 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 GAP43P17677 238 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 PDIK1LQ8N165 341 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 SRPRBQ9Y5M8 271 aaKnown RBP17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 SNAP23O00161 211 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 KLC3Q6P597 504 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 TEX2Q8IWB9 1127 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 PANX2Q96RD6 677 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 TMEM260Q9NX78 707 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 KCNG1Q9UIX4 513 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 FAM196BA6NMK8 535 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 CCNE1P24864 410 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 CCND2P30279 289 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 PMS2P54278 862 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 DRP2Q13474 957 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 RASSF3Q86WH2 238 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 USP6NLQ92738 828 aa17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 PIH1D3Q9NQM4 214 aaKnown RBP17.97■□□□□ 0.47
TSPAN3-201ENST00000267970 PPEF1O14829 653 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 ZFXP17010 805 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 MDM2Q00987 491 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 KCTD2Q14681 263 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 LBRQ14739 615 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 TAGAPQ8N103 731 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 NACC1Q96RE7 527 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 CNOT8Q9UFF9 292 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 ARHGEF9O43307 516 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 SERPINI2O75830 405 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 ALDH18A1P54886 795 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 MTM1Q13496 603 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 FBXW10Q5XX13 1052 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 RNF139Q8WU17 664 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 ATP6V0A1Q93050 837 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 ZFYVE19Q96K21 471 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 SMAD5Q99717 465 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 PRMT1Q99873 361 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 STAT2P52630 851 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 GPR162Q16538 588 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 SYDE2Q5VT97 1194 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 ZNF229Q9UJW7 825 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 PP2D1A8MPX8 630 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 SLC9A5Q14940 896 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 CDC37Q16543 378 aaPredicted RBP17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 DCTN3O75935 186 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 CRKLP46109 303 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 TBCCQ15814 346 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 RBBP7Q16576 425 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 RPF1Q9H9Y2 349 aaKnown RBP17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 LMCD1Q9NZU5 365 aa17.96■□□□□ 0.47
TSPAN3-201ENST00000267970 FOXN1O15353 648 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 PRCPP42785 496 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 MRPS15P82914 257 aaKnown RBP17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 NME3Q13232 169 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 DSTYKQ6XUX3 929 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 FGFR1OP2Q9NVK5 253 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 TEKT2Q9UIF3 430 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 TEX33O43247 280 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 STAT3P40763 770 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 MAP3K7CLP57077 242 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 AP1B1Q10567 949 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 IMPG1Q17R60 797 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 PDXDC2PQ6P474 469 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 RCOR1Q9UKL0 485 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 CHEK2O96017 543 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 CACNB2Q08289 660 aaPredicted RBP17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 MTF1Q14872 753 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 ASPRV1Q53RT3 343 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 MMS22LQ6ZRQ5 1243 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 NLRP14Q86W24 1093 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms