RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 PTPN14Q15678 1187 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 CCDC6Q16204 474 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 LETM2Q2VYF4 491 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 PRR23CQ6ZRP0 262 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 CYFIP1Q7L576 1253 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 VSIG10LQ86VR7 867 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 TRMT2AQ8IZ69 625 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 FRAT1Q92837 279 aaPredicted RBP9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 MYADMQ96S97 322 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 GPR20Q99678 358 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 USP26Q9BXU7 913 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 CDHR5Q9HBB8 845 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 ZNF287Q9HBT7 754 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 WDR19Q8NEZ3 1342 aa9.29□□□□□ -0.92
PPP4R1-211ENST00000578875 FAM170BA6NMN3 283 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 PATL2C9JE40 543 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 CFBP00751 764 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 IFIT2P09913 472 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 PDHBP11177 359 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 ATP5JP18859 108 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 GBP2P32456 591 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 IGBP1P78318 339 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 GPC5P78333 572 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 MRPS6P82932 125 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 SP4Q02446 784 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 KRT17Q04695 432 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 PPARAQ07869 468 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 SMC1AQ14683 1233 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 CABP7Q86V35 215 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 LURAP1LQ8IV03 231 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 CASD1Q96PB1 797 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 SEC62Q99442 399 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 ADAM2Q99965 735 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 PDCD2LQ9BRP1 358 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 FTHL17Q9BXU8 183 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 RNF19AQ9NV58 838 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 DSPP15924 2871 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 NRCAMQ92823 1304 aa9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 FNDC1Q4ZHG4 1894 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-211ENST00000578875 C9IYK1 514 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 NOP56O00567 594 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 OPLAHO14841 1288 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 GIPC1O14908 333 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 GPAA1O43292 621 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 KCNK5O95279 499 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 CENPBP07199 599 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 HSPD1P10809 573 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 LAG3P18627 525 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 MARK3P27448 753 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 ZNF543Q08ER8 600 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 UBXN2BQ14CS0 331 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 WTAPQ15007 396 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 TAF2Q6P1X5 1199 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 C19orf48Q6RUI8 117 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 BBXQ8WY36 941 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 BORCS6Q96GS4 357 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 BBC3Q96PG8 261 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 BCO2Q9BYV7 579 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 SPG21Q9NZD8 308 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 DACH1Q9UI36 760 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 WASF3Q9UPY6 502 aa9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 HELZ2Q9BYK8 2649 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-211ENST00000578875 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 KANSL1LA0AUZ9 987 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 MBLAC1A4D2B0 266 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 ANP32CO43423 234 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 RANBP6O60518 1105 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 HOXA13P31271 388 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 METAP2P50579 478 aaKnown RBP eCLIP9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 PPFIA1Q13136 1202 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 PAK2Q13177 524 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 SRSF5Q13243 272 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 SEMA3FQ13275 785 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 FZD5Q13467 585 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 PGM5Q15124 567 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 SF3A2Q15428 464 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 GRIK4Q16099 956 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 CSRP2Q16527 193 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 IL31Q6EBC2 164 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 CEP85Q6P2H3 762 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 PRR23BQ6ZRT6 265 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 RSPH3Q86UC2 560 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 SLC39A11Q8N1S5 342 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 CLASRPQ8N2M8 674 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 YTHDC1Q96MU7 727 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 ZNF558Q96NG5 402 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 CELF4Q9BZC1 486 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 VAT1LQ9HCJ6 419 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 RGS18Q9NS28 235 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 DZANK1Q9NVP4 752 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 RTEL1Q9NZ71 1219 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 TUBE1Q9UJT0 475 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 NOC2LQ9Y3T9 749 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 TRPV2Q9Y5S1 764 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 IGSF9BQ9UPX0 1349 aa9.26□□□□□ -0.93
PPP4R1-211ENST00000578875 AKAP13Q12802 2813 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 HRO43593 1189 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 RETP07949 1114 aa9.25□□□□□ -0.93
PPP4R1-211ENST00000578875 TGFB3P10600 412 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms