RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 ZNF662Q6ZS27 426 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 DCAF4Q8WV16 495 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 LSM14BQ9BX40 385 aaKnown RBP16.24■□□□□ 0.19
TTC3-219ENST00000485402 SIK3Q9Y2K2 1263 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 ARFGEF1Q9Y6D6 1849 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 RAD51CO43502 376 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 TBC1D12O60347 775 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 ASNSP08243 561 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 GNA11P29992 359 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 SFMBT2Q5VUG0 894 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 FAM133AQ8N9E0 248 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 GIMAP7Q8NHV1 300 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 TBCKQ8TEA7 893 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 ECM2O94769 699 aaPredicted RBP16.24■□□□□ 0.19
TTC3-219ENST00000485402 NONOQ15233 471 aaKnown RBP eCLIP16.24■□□□□ 0.195e-9■■■■□ 22.3
TTC3-219ENST00000485402 PTGISQ16647 500 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 USH1GQ495M9 461 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 KIAA1755Q5JYT7 1200 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 FAM83BQ5T0W9 1011 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 CCDC121Q6ZUS5 278 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 IQCKQ8N0W5 287 aa16.24■□□□□ 0.19
TTC3-219ENST00000485402 COL2A1P02458 1487 aaPredicted RBP16.23■□□□□ 0.19
TTC3-219ENST00000485402 ZBTB5O15062 677 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 MDH1P40925 334 aaKnown RBP16.23■□□□□ 0.19
TTC3-219ENST00000485402 SKOR1P84550 965 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 MYCBPAPQ8TBZ2 947 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 ZNF341Q9BYN7 854 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 ZMYND12Q9H0C1 365 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 PPP1R11O60927 126 aaPredicted RBP16.23■□□□□ 0.19
TTC3-219ENST00000485402 TAL1P17542 331 aaPredicted RBP16.23■□□□□ 0.19
TTC3-219ENST00000485402 CTNNA1P35221 906 aaKnown RBP16.23■□□□□ 0.19
TTC3-219ENST00000485402 MMP14P50281 582 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 E2F5Q15329 346 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 QRICH1Q2TAL8 776 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 ATP6V1G3Q96LB4 118 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 KLHL30Q0D2K2 578 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 CDC37Q16543 378 aaPredicted RBP16.23■□□□□ 0.19
TTC3-219ENST00000485402 CAVIN3Q969G5 261 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 GOPCQ9HD26 462 aa16.23■□□□□ 0.19
TTC3-219ENST00000485402 A0A1W2PQJ5 194 aa16.22■□□□□ 0.19
TTC3-219ENST00000485402 PRLRP16471 622 aa16.22■□□□□ 0.19
TTC3-219ENST00000485402 PDXDC1Q6P996 788 aa16.22■□□□□ 0.19
TTC3-219ENST00000485402 ADAT2Q7Z6V5 191 aaKnown RBP16.22■□□□□ 0.19
TTC3-219ENST00000485402 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.22■□□□□ 0.19
TTC3-219ENST00000485402 TMX2Q9Y320 296 aa16.22■□□□□ 0.19
TTC3-219ENST00000485402 PCDHA1Q9Y5I3 950 aa16.22■□□□□ 0.19
TTC3-219ENST00000485402 SMIM23A6NLE4 172 aa16.22■□□□□ 0.19
TTC3-219ENST00000485402 GCOM1H8Y6P7 765 aaPredicted RBP16.22■□□□□ 0.19
TTC3-219ENST00000485402 MYZAPP0CAP1 466 aa16.22■□□□□ 0.19
TTC3-219ENST00000485402 UBE2SQ16763 222 aa16.22■□□□□ 0.19
TTC3-219ENST00000485402 REXO1Q8N1G1 1221 aaKnown RBP16.22■□□□□ 0.19
TTC3-219ENST00000485402 GMCL1P1Q8NEA9 526 aa16.22■□□□□ 0.19
TTC3-219ENST00000485402 ZKSCAN4Q969J2 545 aaPredicted RBP16.22■□□□□ 0.19
TTC3-219ENST00000485402 TSG101Q99816 390 aa16.22■□□□□ 0.19
TTC3-219ENST00000485402 A0A087X0T9 212 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 FAM228BP0C875 321 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 DGKZQ13574 1117 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 NEK8Q86SG6 692 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 C7orf25Q9BPX7 421 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 NUDT12Q9BQG2 462 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 DDX47Q9H0S4 455 aaKnown RBP16.21■□□□□ 0.19
TTC3-219ENST00000485402 PHF20L1A8MW92 1017 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 MYL1P05976 194 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 EPB41P11171 864 aaKnown RBP16.21■□□□□ 0.19
TTC3-219ENST00000485402 ADCY7P51828 1080 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 CDK17Q00537 523 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 CENPPQ6IPU0 288 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 PRPF38AQ8NAV1 312 aaKnown RBP16.21■□□□□ 0.19
TTC3-219ENST00000485402 SNX29Q8TEQ0 813 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 BAP1Q92560 729 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 WRNIP1Q96S55 665 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 DPH5Q9H2P9 285 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 FRMD3A2A2Y4 597 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 FGFR1OPO95684 399 aaKnown RBP16.21■□□□□ 0.19
TTC3-219ENST00000485402 KDM7AQ6ZMT4 941 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 APOBEC3FQ8IUX4 373 aaKnown RBP16.21■□□□□ 0.19
TTC3-219ENST00000485402 CCDC13Q8IYE1 715 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 CNPY4Q8N129 248 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 LARP4BQ92615 738 aaKnown RBP16.21■□□□□ 0.19
TTC3-219ENST00000485402 DDX12PQ92771 950 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 LUC7LQ9NQ29 371 aaKnown RBP16.21■□□□□ 0.19
TTC3-219ENST00000485402 KLC4Q9NSK0 619 aa16.21■□□□□ 0.19
TTC3-219ENST00000485402 NOVA2Q9UNW9 492 aaKnown RBP16.21■□□□□ 0.19
TTC3-219ENST00000485402 RPS6KA1Q15418 735 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 FIGNQ5HY92 759 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 SWT1Q5T5J6 900 aaKnown RBP16.2■□□□□ 0.18
TTC3-219ENST00000485402 SYDE2Q5VT97 1194 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 GALNT17Q6IS24 598 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 DPY19L2Q6NUT2 758 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 GMCL1Q96IK5 515 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 STAT2P52630 851 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 TNNC1P63316 161 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 PRPF4BQ13523 1007 aaKnown RBP16.2■□□□□ 0.18
TTC3-219ENST00000485402 CALCRLQ16602 461 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 PIK3R5Q8WYR1 880 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 FAM212AQ96EL1 285 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 MMTAG2Q9BU76 263 aaKnown RBP16.2■□□□□ 0.18
TTC3-219ENST00000485402 FBXO28Q9NVF7 368 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 TLDC2A0PJX2 215 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 CCDC172P0C7W6 258 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms