RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TMED8Q6PL24 325 aaPredicted RBP14.37□□□□□ -0.11
NFKB1-202ENST00000394820 RSRC1Q96IZ7 334 aaKnown RBP14.37□□□□□ -0.11
NFKB1-202ENST00000394820 TLR10Q9BXR5 811 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 DBR1Q9UK59 544 aaKnown RBP14.37□□□□□ -0.11
NFKB1-202ENST00000394820 DNM3Q9UQ16 869 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 PDS5AQ29RF7 1337 aaKnown RBP14.37□□□□□ -0.11
NFKB1-202ENST00000394820 BCL9LQ86UU0 1499 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 NID2Q14112 1375 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 AGPSO00116 658 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 RHOBTB3O94955 611 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 TRIM49P0CI25 452 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 TRIM49CP0CI26 452 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 KRT5P13647 590 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 FGFR4P22455 802 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 KCNJ1P48048 391 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 CDC42EP5Q6NZY7 148 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 TAOK3Q9H2K8 898 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 BHMT2Q9H2M3 363 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 SERPING1P05155 500 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 SCP2P22307 547 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 CHRNA5P30532 468 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 COASYQ13057 564 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 CERKLQ49MI3 558 aaPredicted RBP14.37□□□□□ -0.11
NFKB1-202ENST00000394820 ELOA2Q8IYF1 753 aaPredicted RBP14.37□□□□□ -0.11
NFKB1-202ENST00000394820 KIAA0895Q8NCT3 520 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 CUL5Q93034 780 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 SPZ1Q9BXG8 430 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 DAAM1Q9Y4D1 1078 aa14.37□□□□□ -0.11
NFKB1-202ENST00000394820 A0A1B0GUA9 196 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 TCP10L2B9ZVM9 353 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 MMEP08473 750 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 PLA2G4BP0C869 781 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 HARSP12081 509 aaKnown RBP14.36□□□□□ -0.11
NFKB1-202ENST00000394820 CCDC6Q16204 474 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 KRT27Q7Z3Y8 459 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 KCNK18Q7Z418 384 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 MYCBPAPQ8TBZ2 947 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 FMO2Q99518 471 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 TDRD3Q9H7E2 651 aaKnown RBP14.36□□□□□ -0.11
NFKB1-202ENST00000394820 VIPAS39Q9H9C1 493 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 JMJD4Q9H9V9 463 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 MTRF1LQ9UGC7 380 aaKnown RBP14.36□□□□□ -0.11
NFKB1-202ENST00000394820 TRPC5Q9UL62 973 aaPredicted RBP14.36□□□□□ -0.11
NFKB1-202ENST00000394820 DUOX1Q9NRD9 1551 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 PCK1P35558 622 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 PDXDC1Q6P996 788 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 HVCN1Q96D96 273 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 AZI2Q9H6S1 392 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 PLAGL2Q9UPG8 496 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 NOC2LQ9Y3T9 749 aaKnown RBP14.36□□□□□ -0.11
NFKB1-202ENST00000394820 NHSL1Q5SYE7 1610 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 TARSL2A2RTX5 802 aaKnown RBP14.36□□□□□ -0.11
NFKB1-202ENST00000394820 WDR91A4D1P6 747 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 OPLAHO14841 1288 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 PBX1P40424 430 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 PTK2Q05397 1052 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 NUGGCQ68CJ6 796 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 GALNT17Q6IS24 598 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 CCDC13Q8IYE1 715 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 FBF1Q8TES7 1133 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 CCSER1Q9C0I3 900 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 LRRC27Q9C0I9 530 aa14.36□□□□□ -0.11
NFKB1-202ENST00000394820 CCDC197Q8NCU1 140 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 ERMNQ8TAM6 284 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 CYFIP2Q96F07 1278 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 EPN3Q9H201 632 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 RASAL2Q9UJF2 1139 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 MYH15Q9Y2K3 1946 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 MYH10P35580 1976 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 CRKP46108 304 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 CTTNQ14247 550 aaKnown RBP14.35□□□□□ -0.11
NFKB1-202ENST00000394820 CCDC174Q6PII3 467 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 PPM1KQ8N3J5 372 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 IKZF4Q9H2S9 585 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 TAF1DQ9H5J8 278 aaPredicted RBP14.35□□□□□ -0.11
NFKB1-202ENST00000394820 HOMER2Q9NSB8 354 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 COL16A1Q07092 1604 aaPredicted RBP14.35□□□□□ -0.11
NFKB1-202ENST00000394820 MYH6P13533 1939 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 ANKRD36CQ5JPF3 1778 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 KLRC4O43908 158 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 IFNB1P01574 187 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 HSD17B3P37058 310 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 NEDD9Q14511 834 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 ZNF449Q6P9G9 518 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 UNC13DQ70J99 1090 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 DPH6Q7L8W6 267 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 SFR1Q86XK3 245 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 SLC40A1Q9NP59 571 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 KBTBD4Q9NVX7 518 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 TSKSQ9UJT2 592 aa14.35□□□□□ -0.11
NFKB1-202ENST00000394820 ZNF233A6NK53 670 aa14.34□□□□□ -0.11
NFKB1-202ENST00000394820 CHUKO15111 745 aa14.34□□□□□ -0.11
NFKB1-202ENST00000394820 UPP2O95045 317 aa14.34□□□□□ -0.11
NFKB1-202ENST00000394820 GRB10Q13322 594 aa14.34□□□□□ -0.11
NFKB1-202ENST00000394820 PTGISQ16647 500 aa14.34□□□□□ -0.11
NFKB1-202ENST00000394820 KLHDC7AQ5VTJ3 777 aa14.34□□□□□ -0.11
NFKB1-202ENST00000394820 SPIRE2Q8WWL2 714 aa14.34□□□□□ -0.11
NFKB1-202ENST00000394820 GOLGA8IPA6NC78 632 aa14.34□□□□□ -0.11
NFKB1-202ENST00000394820 GOLGA8JA6NMD2 632 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms