RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 NEK9Q8TD19 979 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 NSUN4Q96CB9 384 aaKnown RBP10.5□□□□□ -0.73
LRRC40-201ENST00000370952 SAAL1Q96ER3 474 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 ACSBG1Q96GR2 724 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 TXLNGYQ9BZA5 131 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 OSGEPQ9NPF4 335 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 SPATS2LQ9NUQ6 558 aaKnown RBP10.5□□□□□ -0.73
LRRC40-201ENST00000370952 STK17AQ9UEE5 414 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 DBR1Q9UK59 544 aaKnown RBP10.5□□□□□ -0.73
LRRC40-201ENST00000370952 PNMA3Q9UL41 463 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 KLRF2D3W0D1 207 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 KLRK1P26718 216 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 CALRP27797 417 aaKnown RBP10.5□□□□□ -0.73
LRRC40-201ENST00000370952 PRDX5P30044 214 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 IFI16Q16666 785 aaKnown RBP10.5□□□□□ -0.73
LRRC40-201ENST00000370952 CCDC152Q4G0S7 254 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 GALNT17Q6IS24 598 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 MIS18BP1Q6P0N0 1132 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 GJB7Q6PEY0 223 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 NT5DC3Q86UY8 548 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 PROM2Q8N271 834 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 RBM46Q8TBY0 533 aaKnown RBP10.5□□□□□ -0.73
LRRC40-201ENST00000370952 CCHCR1Q8TD31 782 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 SEC14L1Q92503 715 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 KLHL29Q96CT2 875 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 SEMA4AQ9H3S1 761 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 ZHX3Q9H4I2 956 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 FGFR1OP2Q9NVK5 253 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 SLC5A4Q9NY91 659 aa10.5□□□□□ -0.73
LRRC40-201ENST00000370952 AJAP1Q9UKB5 411 aaPredicted RBP10.5□□□□□ -0.73
LRRC40-201ENST00000370952 COL22A1Q8NFW1 1626 aaPredicted RBP10.49□□□□□ -0.73
LRRC40-201ENST00000370952 ZNF804BA4D1E1 1349 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 FGFR4P22455 802 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 RASGEF1CQ8N431 466 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 SPDYE1Q8NFV5 336 aaPredicted RBP10.49□□□□□ -0.73
LRRC40-201ENST00000370952 U2AF1L4Q8WU68 220 aaKnown RBP10.49□□□□□ -0.73
LRRC40-201ENST00000370952 DNAJC19Q96DA6 116 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 PABPC3Q9H361 631 aaKnown RBP10.49□□□□□ -0.73
LRRC40-201ENST00000370952 C6orf50Q9HD87 102 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 ZDHHC18Q9NUE0 388 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 STXBP5LQ9Y2K9 1186 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 EVI5O60447 810 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 SNX3O60493 162 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 ADAMTS2O95450 1211 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 H2AFZP0C0S5 128 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 ABL2P42684 1182 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 GNAQP50148 359 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 DR1Q01658 176 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 ADAM9Q13443 819 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 THEMIS2Q5TEJ8 643 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 AADACL2Q6P093 401 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 H2AFVQ71UI9 128 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 OTUD6AQ7L8S5 288 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 DYDC1Q8WWB3 177 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 MKNK2Q9HBH9 465 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 RTCBQ9Y3I0 505 aaKnown RBP10.49□□□□□ -0.73
LRRC40-201ENST00000370952 DAAM1Q9Y4D1 1078 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 LAMB1P07942 1786 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 SHANK3Q9BYB0 1731 aa10.49□□□□□ -0.73
LRRC40-201ENST00000370952 CCDC169A6NNP5 214 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 BTNL10A8MVZ5 291 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 FOXO6A8MYZ6 492 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 AP1G2O75843 785 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ALADP13716 330 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 UCHL3P15374 230 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 SOGA3Q5TF21 947 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 DCAF12L1Q5VU92 463 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 KRT79Q5XKE5 535 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 USP17L2Q6R6M4 530 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ARHGAP27Q6ZUM4 889 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 DGKHQ86XP1 1220 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 MTMR9Q96QG7 549 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 TMEM47Q9BQJ4 181 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ERP44Q9BS26 406 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 RAB17Q9H0T7 212 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 SUCLA2Q9P2R7 463 aaPredicted RBP10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ARPP21Q9UBL0 812 aaPredicted RBP10.48□□□□□ -0.73
LRRC40-201ENST00000370952 PPP1R9AQ9ULJ8 1098 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 TCP11X1B4DZS4 312 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 NUDT17P0C025 328 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 TSPY3P0CV98 308 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 TSPY8P0CW00 308 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 KRT13P13646 458 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 CREB1P16220 341 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ATF3P18847 181 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ABCB4P21439 1286 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 KLRC3Q07444 240 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 TMEM266Q2M3C6 531 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ANKRD20A2Q5SQ80 823 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ANKRD20A1Q5TYW2 823 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ANKRD20A3Q5VUR7 823 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 DUPD1Q68J44 220 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 TRIM68Q6AZZ1 485 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 REXO1Q8N1G1 1221 aaKnown RBP10.48□□□□□ -0.73
LRRC40-201ENST00000370952 PGM2Q96G03 612 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 FAM84BQ96KN1 310 aaPredicted RBP10.48□□□□□ -0.73
LRRC40-201ENST00000370952 PIGSQ96S52 555 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 UBA5Q9GZZ9 404 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 NSRP1Q9H0G5 558 aaKnown RBP10.48□□□□□ -0.73
LRRC40-201ENST00000370952 AMFRQ9UKV5 643 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms