RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 SETD4Q9NVD3 440 aa21.47■■□□□ 1.03
DDX39A-214ENST00000590556 DNAH12Q6ZR08 3092 aa21.47■■□□□ 1.03
DDX39A-214ENST00000590556 SPTLC2O15270 562 aa21.46■■□□□ 1.03
DDX39A-214ENST00000590556 YEATS4O95619 227 aa21.46■■□□□ 1.03
DDX39A-214ENST00000590556 OATP04181 439 aa21.46■■□□□ 1.03
DDX39A-214ENST00000590556 GNAT1P11488 350 aa21.46■■□□□ 1.03
DDX39A-214ENST00000590556 INSRRP14616 1297 aa21.46■■□□□ 1.03
DDX39A-214ENST00000590556 NCLP19338 710 aaKnown RBP21.46■■□□□ 1.03
DDX39A-214ENST00000590556 HAUS3Q68CZ6 603 aa21.46■■□□□ 1.03
DDX39A-214ENST00000590556 GDF6Q6KF10 455 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-214ENST00000590556 FAM126BQ8IXS8 530 aa21.46■■□□□ 1.03
DDX39A-214ENST00000590556 POLR3CQ9BUI4 534 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-214ENST00000590556 TUFT1Q9NNX1 390 aa21.46■■□□□ 1.03
DDX39A-214ENST00000590556 TRMT13Q9NUP7 481 aaKnown RBP21.46■■□□□ 1.03
DDX39A-214ENST00000590556 CHMP5Q9NZZ3 219 aa21.46■■□□□ 1.03
DDX39A-214ENST00000590556 SRPRBQ9Y5M8 271 aaKnown RBP21.46■■□□□ 1.03
DDX39A-214ENST00000590556 MORC2Q9Y6X9 1032 aaPredicted RBP21.46■■□□□ 1.03
DDX39A-214ENST00000590556 ALPK3Q96L96 1907 aa21.46■■□□□ 1.03
DDX39A-214ENST00000590556 NRCAMQ92823 1304 aa21.46■■□□□ 1.03
DDX39A-214ENST00000590556 RRN3P2A6NIE6 340 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 DDX11L8A8MPP1 907 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 EVI5O60447 810 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 B4GALT4O60513 344 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 LONP1P36776 959 aaKnown RBP21.45■■□□□ 1.02
DDX39A-214ENST00000590556 CCT6AP40227 531 aaKnown RBP21.45■■□□□ 1.02
DDX39A-214ENST00000590556 KRT85P78386 507 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 GRIK4Q16099 956 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 PTGISQ16647 500 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 XKR3Q5GH77 459 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 KRT79Q5XKE5 535 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 CATSPER3Q86XQ3 398 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 AK8Q96MA6 479 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 WRAP73Q9P2S5 460 aaPredicted RBP21.45■■□□□ 1.02
DDX39A-214ENST00000590556 FBXO2Q9UK22 296 aaPredicted RBP21.45■■□□□ 1.02
DDX39A-214ENST00000590556 NOD1Q9Y239 953 aa21.45■■□□□ 1.02
DDX39A-214ENST00000590556 TRIP12Q14669 1992 aaPredicted RBP21.45■■□□□ 1.02
DDX39A-214ENST00000590556 PP2D1A8MPX8 630 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 MED24O75448 989 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 CD4P01730 458 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 SPATA31C1P0DKV0 1188 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 RPA1P27694 616 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 CDC25AP30304 524 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 HOXC8P31273 242 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 IGBP1P78318 339 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 ZNF200P98182 395 aaPredicted RBP21.44■■□□□ 1.02
DDX39A-214ENST00000590556 GRIN1Q05586 938 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 FAAP100Q0VG06 881 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 HIC1Q14526 733 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 ZNF484Q5JVG2 852 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 C4orf19Q8IY42 314 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 C7orf61Q8IZ16 206 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 KRI1Q8N9T8 703 aaKnown RBP21.44■■□□□ 1.02
DDX39A-214ENST00000590556 SNX29Q8TEQ0 813 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 LMBR1Q8WVP7 490 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 CHAMP1Q96JM3 812 aa21.44■■□□□ 1.02
DDX39A-214ENST00000590556 SEPT9Q9UHD8 586 aaPredicted RBP21.44■■□□□ 1.02
DDX39A-214ENST00000590556 PPP6R2O75170 966 aa21.43■■□□□ 1.02
DDX39A-214ENST00000590556 STBD1O95210 358 aa21.43■■□□□ 1.02
DDX39A-214ENST00000590556 LYPLA2O95372 231 aa21.43■■□□□ 1.02
DDX39A-214ENST00000590556 CLTBP09497 229 aa21.43■■□□□ 1.02
DDX39A-214ENST00000590556 KCNG4Q8TDN1 519 aa21.43■■□□□ 1.02
DDX39A-214ENST00000590556 TRAPPC12Q8WVT3 735 aa21.43■■□□□ 1.02
DDX39A-214ENST00000590556 CSRNP2Q9H175 543 aa21.43■■□□□ 1.02
DDX39A-214ENST00000590556 COL1A2P08123 1366 aa21.43■■□□□ 1.02
DDX39A-214ENST00000590556 TREHO43280 583 aa21.42■■□□□ 1.02
DDX39A-214ENST00000590556 ADAM17P78536 824 aa21.42■■□□□ 1.02
DDX39A-214ENST00000590556 TCHHQ07283 1943 aa21.42■■□□□ 1.02
DDX39A-214ENST00000590556 ANO5Q75V66 913 aa21.42■■□□□ 1.02
DDX39A-214ENST00000590556 OTUD6AQ7L8S5 288 aa21.42■■□□□ 1.02
DDX39A-214ENST00000590556 CLIC6Q96NY7 704 aa21.42■■□□□ 1.02
DDX39A-214ENST00000590556 NIFKQ9BYG3 293 aaKnown RBP21.42■■□□□ 1.02
DDX39A-214ENST00000590556 TMEM39AQ9NV64 488 aa21.42■■□□□ 1.02
DDX39A-214ENST00000590556 RCOR1Q9UKL0 485 aa21.42■■□□□ 1.02
DDX39A-214ENST00000590556 MKI67P46013 3256 aaKnown RBP21.41■■□□□ 1.02
DDX39A-214ENST00000590556 TMEM150BA6NC51 233 aa21.41■■□□□ 1.02
DDX39A-214ENST00000590556 ZBTB42B2RXF5 422 aa21.41■■□□□ 1.02
DDX39A-214ENST00000590556 CYP2C9P11712 490 aa21.41■■□□□ 1.02
DDX39A-214ENST00000590556 MUTP22033 750 aa21.41■■□□□ 1.02
DDX39A-214ENST00000590556 YWHABP31946 246 aaKnown RBP21.41■■□□□ 1.02
DDX39A-214ENST00000590556 UBA7P41226 1012 aa21.41■■□□□ 1.02
DDX39A-214ENST00000590556 MLLT1Q03111 559 aaPredicted RBP21.41■■□□□ 1.02
DDX39A-214ENST00000590556 MARCH8Q5T0T0 291 aa21.41■■□□□ 1.02
DDX39A-214ENST00000590556 POTEGQ6S5H5 508 aa21.41■■□□□ 1.02
DDX39A-214ENST00000590556 SPATA32Q96LK8 384 aa21.41■■□□□ 1.02
DDX39A-214ENST00000590556 NACC1Q96RE7 527 aa21.41■■□□□ 1.02
DDX39A-214ENST00000590556 MMTAG2Q9BU76 263 aaKnown RBP21.41■■□□□ 1.02
DDX39A-214ENST00000590556 PRDM5Q9NQX1 630 aaPredicted RBP21.41■■□□□ 1.02
DDX39A-214ENST00000590556 TUBE1Q9UJT0 475 aa21.41■■□□□ 1.02
DDX39A-214ENST00000590556 NR2E3Q9Y5X4 410 aa21.41■■□□□ 1.02
DDX39A-214ENST00000590556 ZBTB39O15060 712 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 KLRC1P26715 233 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 ME1P48163 572 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 ZRSR1Q15695 479 aaKnown RBP21.4■■□□□ 1.02
DDX39A-214ENST00000590556 ECM1Q16610 540 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 MTERF2Q49AM1 385 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 PLA2G4FQ68DD2 849 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 CABP7Q86V35 215 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 SERINC5Q86VE9 423 aa21.4■■□□□ 1.02
DDX39A-214ENST00000590556 LEO1Q8WVC0 666 aaPredicted RBP21.4■■□□□ 1.02
DDX39A-214ENST00000590556 CTAGE1Q96RT6 745 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms