RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 SOWAHDA6NJG2 315 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 UNCXA6NJT0 531 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 WDR64B1ANS9 1081 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 CXCL11O14625 94 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 DHX15O43143 795 aaKnown RBP11.46□□□□□ -0.57
VPS25-203ENST00000589520 SLU7O95391 586 aaKnown RBP11.46□□□□□ -0.57
VPS25-203ENST00000589520 TAL1P17542 331 aaPredicted RBP11.46□□□□□ -0.57
VPS25-203ENST00000589520 CASQ1P31415 396 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 ABCD1P33897 745 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 COPB2P35606 906 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 PSMC5P62195 406 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 MRPS9P82933 396 aaKnown RBP11.46□□□□□ -0.57
VPS25-203ENST00000589520 PPATQ06203 517 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 GOLGA8FQ08AF8 430 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 GOLGA8DPQ0D2H9 430 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 PTPN21Q16825 1174 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 GNPTABQ3T906 1256 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 SNRNP48Q6IEG0 339 aaKnown RBP11.46□□□□□ -0.57
VPS25-203ENST00000589520 ZNF746Q6NUN9 644 aaPredicted RBP11.46□□□□□ -0.57
VPS25-203ENST00000589520 RAD9BQ6WBX8 426 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 SYT10Q6XYQ8 523 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 SFR1Q86XK3 245 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 SMAP1Q8IYB5 467 aaPredicted RBP11.46□□□□□ -0.57
VPS25-203ENST00000589520 MYCT1Q8N699 235 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 PROCA1Q8NCQ7 364 aaPredicted RBP11.46□□□□□ -0.57
VPS25-203ENST00000589520 EHBP1Q8NDI1 1231 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 DNERQ8NFT8 737 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 TMEM174Q8WUU8 243 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 ERO1AQ96HE7 468 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 LXNQ9BS40 222 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 MKNK1Q9BUB5 465 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 ANKEF1Q9NU02 776 aa11.46□□□□□ -0.57
VPS25-203ENST00000589520 LARSQ9P2J5 1176 aaKnown RBP11.46□□□□□ -0.57
VPS25-203ENST00000589520 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.46□□□□□ -0.57
VPS25-203ENST00000589520 ATAD5Q96QE3 1844 aa11.46□□□□□ -0.58
VPS25-203ENST00000589520 DOCK1Q14185 1865 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 NFASCO94856 1347 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 NPHP3-ACAD11A0A0J9YXS1 232 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 CHMP2AO43633 222 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 GRIN3BO60391 1043 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 NR3C2P08235 984 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 HSPA1AP0DMV8 641 aaKnown RBP11.45□□□□□ -0.58
VPS25-203ENST00000589520 HSPA1BP0DMV9 641 aaKnown RBP11.45□□□□□ -0.58
VPS25-203ENST00000589520 EPB41P11171 864 aaKnown RBP11.45□□□□□ -0.58
VPS25-203ENST00000589520 SCP2P22307 547 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 UBXN2AP68543 259 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 BAATQ14032 418 aaPredicted RBP11.45□□□□□ -0.58
VPS25-203ENST00000589520 ARHGAP29Q52LW3 1261 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 NSMFQ6X4W1 530 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 TOGARAM2Q6ZUX3 1019 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 OTUD6AQ7L8S5 288 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 HS2ST1Q7LGA3 356 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 ZNF720Q7Z2F6 126 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 TRIM59Q8IWR1 403 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 NEK11Q8NG66 645 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 RUSC1Q9BVN2 902 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 HAUS4Q9H6D7 363 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 TMEM206Q9H813 350 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 TBC1D7Q9P0N9 293 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 DNAI1Q9UI46 699 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 ZNF214Q9UL59 606 aaPredicted RBP11.45□□□□□ -0.58
VPS25-203ENST00000589520 PLAGL2Q9UPG8 496 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 SCAF8Q9UPN6 1271 aaKnown RBP11.45□□□□□ -0.58
VPS25-203ENST00000589520 SIK3Q9Y2K2 1263 aa11.45□□□□□ -0.58
VPS25-203ENST00000589520 PFASO15067 1338 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 EIF3CLB5ME19 914 aaKnown RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 DDNO94850 711 aaPredicted RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 NDUFA10O95299 355 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 GCNT3O95395 438 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 MYCLP12524 364 aaPredicted RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 EIF2AK2P19525 551 aaKnown RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 NR2F2P24468 414 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 PSMC2P35998 433 aaKnown RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 GNG11P61952 73 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 ERVK-24P63145 666 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 TMEM132BQ14DG7 1078 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 PADI6Q6TGC4 694 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 LBX2Q6XYB7 198 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 ERO1BQ86YB8 467 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 FMNL3Q8IVF7 1028 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 NELFCDQ8IXH7 590 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 FAM178BQ8IXR5 827 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 ANKRD13AQ8IZ07 590 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 PIGOQ8TEQ8 1089 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 DRC1Q96MC2 740 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 CCDC43Q96MW1 224 aaKnown RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 INPP4AQ96PE3 977 aaPredicted RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 UIMC1Q96RL1 719 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 MPHOSPH6Q99547 160 aaKnown RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 EIF3CQ99613 913 aaKnown RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 MOV10L1Q9BXT6 1211 aaKnown RBP11.44□□□□□ -0.58
VPS25-203ENST00000589520 TSGA10Q9BZW7 698 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 ST6GALNAC4Q9H4F1 302 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 C17orf75Q9HAS0 396 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 HOMER2Q9NSB8 354 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 RNF181Q9P0P0 153 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 CEP72Q9P209 647 aa11.44□□□□□ -0.58
VPS25-203ENST00000589520 ARMCX3Q9UH62 379 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms