RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 TRIM59Q8IWR1 403 aa19.37■□□□□ 0.69
RCCD1-204ENST00000555737 CACNA2D3Q8IZS8 1091 aa19.37■□□□□ 0.69
RCCD1-204ENST00000555737 RBM46Q8TBY0 533 aaKnown RBP19.37■□□□□ 0.69
RCCD1-204ENST00000555737 LRRC45Q96CN5 670 aa19.37■□□□□ 0.69
RCCD1-204ENST00000555737 OSBPL7Q9BZF2 842 aa19.37■□□□□ 0.69
RCCD1-204ENST00000555737 ISCUQ9H1K1 167 aa19.37■□□□□ 0.69
RCCD1-204ENST00000555737 C6orf229H3BNL8 230 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 PPP1R12BO60237 982 aaPredicted RBP19.36■□□□□ 0.69
RCCD1-204ENST00000555737 SHBGP04278 402 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 XRCC5P13010 732 aaKnown RBP19.36■□□□□ 0.69
RCCD1-204ENST00000555737 SHROOM1Q2M3G4 852 aaPredicted RBP19.36■□□□□ 0.69
RCCD1-204ENST00000555737 TPTE2Q6XPS3 522 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 EP400NLQ6ZTU2 488 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 MAEAQ7L5Y9 396 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 ARFGAP2Q8N6H7 521 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 TCP11Q8WWU5 503 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 ZKSCAN4Q969J2 545 aaPredicted RBP19.36■□□□□ 0.69
RCCD1-204ENST00000555737 LZTS2Q9BRK4 669 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 GCNT4Q9P109 453 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 LEMD3Q9Y2U8 911 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 PCDHGC5Q9Y5F6 944 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 PPP1R7Q15435 360 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 UBAP2Q5T6F2 1119 aaKnown RBP19.36■□□□□ 0.69
RCCD1-204ENST00000555737 MXD3Q9BW11 206 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 DNAJC17Q9NVM6 304 aaKnown RBP19.36■□□□□ 0.69
RCCD1-204ENST00000555737 EIF4E1BA6NMX2 242 aaKnown RBP19.36■□□□□ 0.69
RCCD1-204ENST00000555737 MED24O75448 989 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 VIMP08670 466 aaKnown RBP19.36■□□□□ 0.69
RCCD1-204ENST00000555737 H2AFZP0C0S5 128 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 SCNN1DP51172 638 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 PPP2R2AP63151 447 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 H2AFVQ71UI9 128 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 OTUD6AQ7L8S5 288 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 N4BP2L2Q92802 583 aaPredicted RBP19.36■□□□□ 0.69
RCCD1-204ENST00000555737 PTPN22Q9Y2R2 807 aa19.36■□□□□ 0.69
RCCD1-204ENST00000555737 UTP11Q9Y3A2 253 aaKnown RBP19.36■□□□□ 0.69
RCCD1-204ENST00000555737 PPP1R11O60927 126 aaPredicted RBP19.35■□□□□ 0.69
RCCD1-204ENST00000555737 CAND2O75155 1236 aa19.35■□□□□ 0.69
RCCD1-204ENST00000555737 CLTAP09496 248 aa19.35■□□□□ 0.69
RCCD1-204ENST00000555737 NEDD1Q8NHV4 660 aa19.35■□□□□ 0.69
RCCD1-204ENST00000555737 IQCDQ96DY2 449 aa19.35■□□□□ 0.69
RCCD1-204ENST00000555737 RNF14Q9UBS8 474 aa19.35■□□□□ 0.69
RCCD1-204ENST00000555737 DOCK2Q92608 1830 aa19.35■□□□□ 0.69
RCCD1-204ENST00000555737 CHRM1P11229 460 aaPredicted RBP19.35■□□□□ 0.69
RCCD1-204ENST00000555737 HSPA9P38646 679 aaKnown RBP19.35■□□□□ 0.69
RCCD1-204ENST00000555737 FXR2P51116 673 aaKnown RBP eCLIP19.35■□□□□ 0.69
RCCD1-204ENST00000555737 PIGOQ8TEQ8 1089 aa19.35■□□□□ 0.69
RCCD1-204ENST00000555737 VCPKMTQ9H867 229 aa19.35■□□□□ 0.69
RCCD1-204ENST00000555737 LDHCP07864 332 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 ECHS1P30084 290 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 USP11P51784 963 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 LRRC14Q15048 493 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 HIBCHQ6NVY1 386 aaPredicted RBP19.34■□□□□ 0.69
RCCD1-204ENST00000555737 FOXO6A8MYZ6 492 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 AKAP3O75969 853 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 CYP11B2P19099 503 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 CACNB3P54284 484 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 AMIGO3Q86WK7 504 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.34■□□□□ 0.692e-7■■■□□ 16.5
RCCD1-204ENST00000555737 JMJD4Q9H9V9 463 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 GEMIN8Q9NWZ8 242 aaKnown RBP19.34■□□□□ 0.69
RCCD1-204ENST00000555737 FSBPO95073 299 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 NF2P35240 595 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 GSTO1P78417 241 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 ZCWPW2Q504Y3 356 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 RUFY4Q6ZNE9 571 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 IRF2BP2Q7Z5L9 587 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 TPCN2Q8NHX9 752 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 GANQ9H2C0 597 aa19.34■□□□□ 0.69
RCCD1-204ENST00000555737 FLOT1O75955 427 aa19.33■□□□□ 0.69
RCCD1-204ENST00000555737 AFPP02771 609 aaKnown RBP19.33■□□□□ 0.69
RCCD1-204ENST00000555737 CCDC172P0C7W6 258 aa19.33■□□□□ 0.69
RCCD1-204ENST00000555737 PON1P27169 355 aa19.33■□□□□ 0.69
RCCD1-204ENST00000555737 CYP2J2P51589 502 aa19.33■□□□□ 0.69
RCCD1-204ENST00000555737 GALCP54803 685 aa19.33■□□□□ 0.69
RCCD1-204ENST00000555737 TCP10Q12799 353 aa19.33■□□□□ 0.69
RCCD1-204ENST00000555737 GKAP1Q5VSY0 366 aaPredicted RBP19.33■□□□□ 0.69
RCCD1-204ENST00000555737 ZNF746Q6NUN9 644 aaPredicted RBP19.33■□□□□ 0.69
RCCD1-204ENST00000555737 CUL5Q93034 780 aa19.33■□□□□ 0.69
RCCD1-204ENST00000555737 NUCKS1Q9H1E3 243 aaKnown RBP19.33■□□□□ 0.69
RCCD1-204ENST00000555737 PLCB1Q9NQ66 1216 aa19.33■□□□□ 0.69
RCCD1-204ENST00000555737 CASZ1Q86V15 1759 aa19.33■□□□□ 0.68
RCCD1-204ENST00000555737 TRIM49P0CI25 452 aa19.33■□□□□ 0.68
RCCD1-204ENST00000555737 TRIM49CP0CI26 452 aa19.33■□□□□ 0.68
RCCD1-204ENST00000555737 SCP2P22307 547 aa19.33■□□□□ 0.68
RCCD1-204ENST00000555737 UBXN2AP68543 259 aa19.33■□□□□ 0.68
RCCD1-204ENST00000555737 ELAC2Q9BQ52 826 aaKnown RBP19.33■□□□□ 0.68
RCCD1-204ENST00000555737 RTFDC1Q9BY42 306 aaPredicted RBP19.33■□□□□ 0.68
RCCD1-204ENST00000555737 BHMT2Q9H2M3 363 aa19.33■□□□□ 0.68
RCCD1-204ENST00000555737 ODF2LQ9ULJ1 636 aa19.33■□□□□ 0.68
RCCD1-204ENST00000555737 ZBTB39O15060 712 aa19.32■□□□□ 0.68
RCCD1-204ENST00000555737 GTF2IP78347 998 aa19.32■□□□□ 0.68
RCCD1-204ENST00000555737 FAM98CQ17RN3 349 aaKnown RBP19.32■□□□□ 0.68
RCCD1-204ENST00000555737 ZC2HC1CQ53FD0 456 aaPredicted RBP19.32■□□□□ 0.68
RCCD1-204ENST00000555737 MSL1Q68DK7 614 aa19.32■□□□□ 0.68
RCCD1-204ENST00000555737 CYB5D1Q6P9G0 228 aa19.32■□□□□ 0.68
RCCD1-204ENST00000555737 ZNF804AQ7Z570 1209 aa19.32■□□□□ 0.68
RCCD1-204ENST00000555737 TBC1D1Q86TI0 1168 aaPredicted RBP19.32■□□□□ 0.68
RCCD1-204ENST00000555737 VPS36Q86VN1 386 aa19.32■□□□□ 0.68
RCCD1-204ENST00000555737 PPP1R9AQ9ULJ8 1098 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms