RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 SPDYE3A6NKU9 549 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 ENPP3O14638 875 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 ST18O60284 1047 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 TCF7P36402 384 aaPredicted RBP13.57□□□□□ -0.24
GABPB1-206ENST00000543881 MTMR1Q13613 665 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 PKN1Q16512 942 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 GIMAP8Q8ND71 665 aaPredicted RBP13.57□□□□□ -0.24
GABPB1-206ENST00000543881 ZNF689Q96CS4 500 aaPredicted RBP13.57□□□□□ -0.24
GABPB1-206ENST00000543881 PGBD1Q96JS3 809 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 PRRX2Q99811 253 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 EHMT1Q9H9B1 1298 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 JADE2Q9NQC1 790 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 PKD2L1Q9P0L9 805 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 TTC3P53804 2025 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 NRCAMQ92823 1304 aa13.57□□□□□ -0.24
GABPB1-206ENST00000543881 GOLGA8AA7E2F4 631 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 GOLGA8BA8MQT2 603 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 DGKIO75912 1065 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 EYA4O95677 639 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 NAPAP54920 295 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 KRT32Q14532 448 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 LPIN1Q14693 890 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 RUFY4Q6ZNE9 571 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 SUGP1Q8IWZ8 645 aaKnown RBP13.56□□□□□ -0.24
GABPB1-206ENST00000543881 CYP2W1Q8TAV3 490 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 P2RX5Q93086 422 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 PPP2R3CQ969Q6 453 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 CDHR1Q96JP9 859 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 RIC8AQ9NPQ8 531 aa13.56□□□□□ -0.24
GABPB1-206ENST00000543881 DNAJB1P25685 340 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 ADD1P35611 737 aaKnown RBP13.55□□□□□ -0.24
GABPB1-206ENST00000543881 ZXDAP98168 799 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 MGAT3Q09327 533 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 TCF15Q12870 199 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 TAF2Q6P1X5 1199 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 ADGRD2Q7Z7M1 963 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 SMRP1Q8NCR6 262 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 SEPT1Q8WYJ6 367 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 PCYT2Q99447 389 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 MXRA8Q9BRK3 442 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 TMEM260Q9NX78 707 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 CLEC1BQ9P126 229 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 SNX14Q9Y5W7 946 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 KIAA1671Q9BY89 1806 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 SMCO2A6NFE2 343 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 LOC730098B7Z3J9 87 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 ADAMTS3O15072 1205 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 ITGB1P05556 798 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 HMGB1P09429 215 aaKnown RBP13.55□□□□□ -0.24
GABPB1-206ENST00000543881 MARK3P27448 753 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 HSPA4P34932 840 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 CLK2P49760 499 aaKnown RBP13.55□□□□□ -0.24
GABPB1-206ENST00000543881 ADCY7P51828 1080 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 APOBRQ0VD83 1088 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 COASYQ13057 564 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 PPP1R18Q6NYC8 613 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 RSPH3Q86UC2 560 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 FBXL6Q8N531 539 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 EFHBQ8N7U6 833 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 SPPL3Q8TCT6 385 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 JAKMIP1Q96N16 626 aaKnown RBP13.55□□□□□ -0.24
GABPB1-206ENST00000543881 KCNH7Q9NS40 1196 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 BARHL2Q9NY43 387 aa13.55□□□□□ -0.24
GABPB1-206ENST00000543881 MRPL42Q9Y6G3 142 aaKnown RBP13.55□□□□□ -0.24
GABPB1-206ENST00000543881 KMT2EQ8IZD2 1858 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 USP34Q70CQ2 3546 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 MAFGO15525 162 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 ARP10275 920 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 RCAN1P53805 252 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 CBX2Q14781 532 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-206ENST00000543881 NAALADL2Q58DX5 795 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 FBXO47Q5MNV8 452 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 MARCH8Q5T0T0 291 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 TSHZ1Q6ZSZ6 1077 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 Q6ZUG5 572 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 CMTR2Q8IYT2 770 aaKnown RBP13.54□□□□□ -0.24
GABPB1-206ENST00000543881 BRF1Q92994 677 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 ZBTB10Q96DT7 871 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 ANO3Q9BYT9 981 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 ERAP1Q9NZ08 941 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 NAP1L2Q9ULW6 460 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-206ENST00000543881 BARX2Q9UMQ3 279 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-206ENST00000543881 CDY2AQ9Y6F7 541 aa13.54□□□□□ -0.24
GABPB1-206ENST00000543881 FOSP01100 380 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-206ENST00000543881 NRIP1P48552 1158 aa13.53□□□□□ -0.24
GABPB1-206ENST00000543881 METAP2P50579 478 aaKnown RBP eCLIP13.53□□□□□ -0.24
GABPB1-206ENST00000543881 PPFIA1Q13136 1202 aa13.53□□□□□ -0.24
GABPB1-206ENST00000543881 ITGB3BPQ13352 177 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-206ENST00000543881 CEP55Q53EZ4 464 aa13.53□□□□□ -0.24
GABPB1-206ENST00000543881 RBM23Q86U06 439 aaKnown RBP13.53□□□□□ -0.24
GABPB1-206ENST00000543881 CRIPAKQ8N1N5 446 aa13.53□□□□□ -0.24
GABPB1-206ENST00000543881 KLHL23Q8NBE8 558 aa13.53□□□□□ -0.24
GABPB1-206ENST00000543881 POF1BQ8WVV4 589 aa13.53□□□□□ -0.24
GABPB1-206ENST00000543881 DNAJB3Q8WWF6 145 aa13.53□□□□□ -0.24
GABPB1-206ENST00000543881 LINC01599Q8WXQ3 324 aa13.53□□□□□ -0.24
GABPB1-206ENST00000543881 GLG1Q92896 1179 aa13.53□□□□□ -0.24
GABPB1-206ENST00000543881 SMARCAD1Q9H4L7 1026 aa13.53□□□□□ -0.24
GABPB1-206ENST00000543881 AGO3Q9H9G7 860 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms