RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 U3KQE9 123 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 ANKRD36CQ5JPF3 1778 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 TCRBV16S1A1N1A0A5B0 115 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 FAM170BA6NMN3 283 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 MARCH6O60337 910 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 THBDP07204 575 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 CD3EP07766 207 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 MYL6BP14649 208 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 CT47A1Q5JQC4 288 aaPredicted RBP8.72□□□□□ -1.01
RFC1-213ENST00000512275 CWF19L1Q69YN2 538 aaKnown RBP8.72□□□□□ -1.01
RFC1-213ENST00000512275 USP53Q70EK8 1073 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 FCRL3Q96P31 734 aaPredicted RBP8.72□□□□□ -1.01
RFC1-213ENST00000512275 API5Q9BZZ5 524 aaKnown RBP8.72□□□□□ -1.01
RFC1-213ENST00000512275 HOMER2Q9NSB8 354 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 DBF4Q9UBU7 674 aaPredicted RBP8.72□□□□□ -1.01
RFC1-213ENST00000512275 MCM8Q9UJA3 840 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 RNF112Q9ULX5 631 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 BACE2Q9Y5Z0 518 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 ABCC4O15439 1325 aa8.72□□□□□ -1.01
RFC1-213ENST00000512275 ARNTLO00327 626 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 RASGRP1O95267 797 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 NPTXRO95502 500 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 EYA4O95677 639 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 IFNGR1P15260 489 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 IGFALSP35858 605 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 CYP27A1Q02318 531 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 STRA8Q7Z7C7 330 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 ITPRIPQ8IWB1 547 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 AHI1Q8N157 1196 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 TMEM57Q8N5G2 664 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 TCTN2Q96GX1 697 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 SLC12A9Q9BXP2 914 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 MTFR1LQ9H019 292 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 DDX21Q9NR30 783 aaKnown RBP eCLIP8.71□□□□□ -1.02
RFC1-213ENST00000512275 STOML1Q9UBI4 398 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 TRAF6Q9Y4K3 522 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 PTPRCP08575 1304 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 BCORQ6W2J9 1755 aa8.71□□□□□ -1.02
RFC1-213ENST00000512275 PXDNLA1KZ92 1463 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 C2orf71A6NGG8 1288 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 AQP7O14520 342 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 ZNF205O95201 554 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 A1BGP04217 495 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 VAV1P15498 845 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 PMLP29590 882 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 OXCT1P55809 520 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 AIMP1Q12904 312 aaKnown RBP8.7□□□□□ -1.02
RFC1-213ENST00000512275 MVPQ14764 893 aaKnown RBP8.7□□□□□ -1.02
RFC1-213ENST00000512275 PCBP1Q15365 356 aaKnown RBP eCLIP8.7□□□□□ -1.02
RFC1-213ENST00000512275 NKPD1Q17RQ9 610 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 CLEC16AQ2KHT3 1053 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 RCSD1Q6JBY9 416 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 PKN3Q6P5Z2 889 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 SLC4A10Q6U841 1118 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 KCNT2Q6UVM3 1135 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 RSPO2Q6UXX9 243 aaPredicted RBP8.7□□□□□ -1.02
RFC1-213ENST00000512275 FERMT3Q86UX7 667 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 PPIL6Q8IXY8 311 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 ARHGAP45Q92619 1136 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 MAGEB10Q96LZ2 347 aaPredicted RBP8.7□□□□□ -1.02
RFC1-213ENST00000512275 MFSD14AQ96MC6 490 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 ZFYVE21Q9BQ24 234 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 CHMP4AQ9BY43 222 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 C4BP0C0L5 1744 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 NUP98P52948 1817 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 ADCY9O60503 1353 aa8.7□□□□□ -1.02
RFC1-213ENST00000512275 C4AP0C0L4 1744 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 TUBGCP6Q96RT7 1819 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 OPA1O60313 960 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 CRTAMO95727 393 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 F13BP05160 661 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 ITPK1Q13572 414 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 SEPT7Q16181 437 aaKnown RBP8.69□□□□□ -1.02
RFC1-213ENST00000512275 RTP2Q5QGT7 225 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 RNF43Q68DV7 783 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 TSPYL5Q86VY4 417 aaPredicted RBP8.69□□□□□ -1.02
RFC1-213ENST00000512275 CCDC103Q8IW40 242 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 SPACA3Q8IXA5 215 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 MKNK2Q9HBH9 465 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 GPRC5CQ9NQ84 441 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 GPATCH2Q9NW75 528 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 HYPKQ9NX55 129 aa8.69□□□□□ -1.02
RFC1-213ENST00000512275 TMEFF2Q9UIK5 374 aaPredicted RBP8.69□□□□□ -1.02
RFC1-213ENST00000512275 RGPD3A6NKT7 1758 aaPredicted RBP8.68□□□□□ -1.02
RFC1-213ENST00000512275 RGPD4Q7Z3J3 1758 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 UBR3Q6ZT12 1888 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 ALG1L2C9J202 215 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 STARD3NLO95772 234 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 S100BP04271 92 aaPredicted RBP8.68□□□□□ -1.02
RFC1-213ENST00000512275 CYP19A1P11511 503 aaPredicted RBP8.68□□□□□ -1.02
RFC1-213ENST00000512275 FSTP19883 344 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 EXOSC10Q01780 885 aaKnown RBP8.68□□□□□ -1.02
RFC1-213ENST00000512275 DHCR24Q15392 516 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 GAB4Q2WGN9 574 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 BRDTQ58F21 947 aaPredicted RBP8.68□□□□□ -1.02
RFC1-213ENST00000512275 ERICH6BQ5W0A0 696 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 E4F1Q66K89 784 aaPredicted RBP8.68□□□□□ -1.02
RFC1-213ENST00000512275 DDX46Q7L014 1031 aaKnown RBP8.68□□□□□ -1.02
RFC1-213ENST00000512275 COPS6Q7L5N1 327 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 LINC00116Q8NCU8 138 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms