RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 UNC5CO95185 931 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 NUDT17P0C025 328 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 MGAT5Q09328 741 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 RCN2Q14257 317 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 ENOX2Q16206 610 aaKnown RBP13.89□□□□□ -0.19
HERC3-203ENST00000407637 CCNJLQ8IV13 435 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 EPS8L3Q8TE67 593 aaKnown RBP13.89□□□□□ -0.19
HERC3-203ENST00000407637 ANKS1AQ92625 1134 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 RNF25Q96BH1 459 aaPredicted RBP13.89□□□□□ -0.19
HERC3-203ENST00000407637 TMEM237Q96Q45 408 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.89□□□□□ -0.19
HERC3-203ENST00000407637 ZMYND12Q9H0C1 365 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 FAM114A2Q9NRY5 505 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 ATXN10Q9UBB4 475 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 UTP11Q9Y3A2 253 aaKnown RBP13.89□□□□□ -0.19
HERC3-203ENST00000407637 LMTK3Q96Q04 1460 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 CCDC169A6NNP5 214 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 O00370 1275 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 CES2O00748 559 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 TLR2O60603 784 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 FCER1AP12319 257 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 KCNA3P22001 575 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 SESN3P58005 492 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 STK4Q13043 487 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 NPY5RQ15761 445 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 DBN1Q16643 649 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 LRP10Q7Z4F1 713 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 TRIM42Q8IWZ5 723 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 FAM13CQ8NE31 585 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.89□□□□□ -0.19
HERC3-203ENST00000407637 MLXIPLQ9NP71 852 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 NMRK1Q9NWW6 199 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.89□□□□□ -0.19
HERC3-203ENST00000407637 RICTORQ6R327 1708 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 ATRNO75882 1429 aa13.89□□□□□ -0.19
HERC3-203ENST00000407637 USP11P51784 963 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 PDE4DQ08499 809 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 TMEM62Q0P6H9 643 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 METTL13Q8N6R0 699 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 ABTB2Q8N961 1025 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 LRRC15Q8TF66 581 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 HPS3Q969F9 1004 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 LUC7LQ9NQ29 371 aaKnown RBP13.88□□□□□ -0.19
HERC3-203ENST00000407637 ZNF532Q9HCE3 1301 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 AGTP01019 485 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 MCAMP43121 646 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 PMS2P54278 862 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 CACNA2D1P54289 1103 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 ARID5AQ03989 594 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 SEC14L1Q92503 715 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 NAPBQ9H115 298 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 PABPC3Q9H361 631 aaKnown RBP13.88□□□□□ -0.19
HERC3-203ENST00000407637 SLITRK6Q9H5Y7 841 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 ANAPC4Q9UJX5 808 aa13.88□□□□□ -0.19
HERC3-203ENST00000407637 A0A087X0T9 212 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 NVLO15381 856 aaKnown RBP13.87□□□□□ -0.19
HERC3-203ENST00000407637 AFPP02771 609 aaKnown RBP13.87□□□□□ -0.19
HERC3-203ENST00000407637 GSTA2P09210 222 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 FAM228BP0C875 321 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 SKIV2L2P42285 1042 aaKnown RBP13.87□□□□□ -0.19
HERC3-203ENST00000407637 SLC29A2Q14542 456 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 AKNAD1Q5T1N1 836 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 ENDOVQ8N8Q3 282 aaKnown RBP13.87□□□□□ -0.19
HERC3-203ENST00000407637 RBBP8NLQ8NC74 664 aaPredicted RBP13.87□□□□□ -0.19
HERC3-203ENST00000407637 ZNF333Q96JL9 665 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 ATP8A2Q9NTI2 1148 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 V9GY48 417 aaPredicted RBP13.87□□□□□ -0.19
HERC3-203ENST00000407637 CCDC88AQ3V6T2 1871 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 PCDH11XQ9BZA7 1347 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 CCDC188H7C350 402 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 ADAMTS3O15072 1205 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 PLEKHA8P1O95397 391 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 LONP1P36776 959 aaKnown RBP13.87□□□□□ -0.19
HERC3-203ENST00000407637 ZC2HC1CQ53FD0 456 aaPredicted RBP13.87□□□□□ -0.19
HERC3-203ENST00000407637 ZNF790Q6PG37 636 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 BICDL1Q6ZP65 573 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 MFSD6Q6ZSS7 791 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 CCDC84Q86UT8 332 aaPredicted RBP13.87□□□□□ -0.19
HERC3-203ENST00000407637 LCA5Q86VQ0 697 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 DNAAF5Q86Y56 855 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 PIH1D3Q9NQM4 214 aaKnown RBP13.87□□□□□ -0.19
HERC3-203ENST00000407637 PRKAG3Q9UGI9 489 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 LRCH1Q9Y2L9 728 aa13.87□□□□□ -0.19
HERC3-203ENST00000407637 ATP9AO75110 1047 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 ENTPD5O75356 428 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 CIAO1O76071 339 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 SERPING1P05155 500 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 MAN2A1Q16706 1144 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 PARP6Q2NL67 630 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 AMOTQ4VCS5 1084 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 SPDYCQ5MJ68 293 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 SOGA3Q5TF21 947 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 SFMBT2Q5VUG0 894 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 OTUD6AQ7L8S5 288 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 ZC3H18Q86VM9 953 aaKnown RBP13.86□□□□□ -0.19
HERC3-203ENST00000407637 COL23A1Q86Y22 540 aaPredicted RBP13.86□□□□□ -0.19
HERC3-203ENST00000407637 GBP5Q96PP8 586 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 SEMA6BQ9H3T3 888 aa13.86□□□□□ -0.19
HERC3-203ENST00000407637 CNNM2Q9H8M5 875 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms