RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 NFU1Q9UMS0 254 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 TARSL2A2RTX5 802 aaKnown RBP9.08□□□□□ -0.96
VPS36-201ENST00000378060 ARHGAP42A6NI28 874 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 CHUKO15111 745 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 CRCPO75575 148 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 STAM2O75886 525 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 MAPK4P31152 587 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 USP14P54578 494 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 CUL4BQ13620 913 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 ALCAMQ13740 583 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 KCNF1Q9H3M0 494 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 LY9Q9HBG7 655 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 COL11A2P13942 1736 aaPredicted RBP9.08□□□□□ -0.96
VPS36-201ENST00000378060 TNNC2P02585 160 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 CHRNA5P30532 468 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 DDIT3P35638 169 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 SLC12A2P55011 1212 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 CCZ1BP86790 482 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 CCZ1P86791 482 aaPredicted RBP9.08□□□□□ -0.96
VPS36-201ENST00000378060 DR1Q01658 176 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 HIBCHQ6NVY1 386 aaPredicted RBP9.08□□□□□ -0.96
VPS36-201ENST00000378060 SHC4Q6S5L8 630 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 LARGE2Q8N3Y3 721 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 POMGNT1Q8WZA1 660 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 RNF34Q969K3 372 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 ZMYND12Q9H0C1 365 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 ANAPC5Q9UJX4 755 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 GFPT2O94808 682 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 DLATP10515 647 aaKnown RBP9.07□□□□□ -0.96
VPS36-201ENST00000378060 GUCY2CP25092 1073 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 SLC7A5Q01650 507 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 TNFAIP1Q13829 316 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 ABCB5Q2M3G0 1257 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 BRDTQ58F21 947 aaPredicted RBP9.07□□□□□ -0.96
VPS36-201ENST00000378060 ICE2Q659A1 982 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 E4F1Q66K89 784 aaPredicted RBP9.07□□□□□ -0.96
VPS36-201ENST00000378060 RPUSD2Q8IZ73 545 aaKnown RBP9.07□□□□□ -0.96
VPS36-201ENST00000378060 NLGN1Q8N2Q7 840 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 ST7Q9NRC1 585 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 TACC3Q9Y6A5 838 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 CDHR2Q9BYE9 1310 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 CTIFO43310 598 aaKnown RBP9.07□□□□□ -0.96
VPS36-201ENST00000378060 PLEKHA8P1O95397 391 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 INHBAP08476 426 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 PRCPP42785 496 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 PPP2R5AQ15172 486 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 TRIM68Q6AZZ1 485 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 PDZD4Q76G19 769 aaPredicted RBP9.07□□□□□ -0.96
VPS36-201ENST00000378060 CYB5R4Q7L1T6 521 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 COG1Q8WTW3 980 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 IFT122Q9HBG6 1241 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 PARVGQ9HBI0 331 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 TESPA1A2RU30 521 aaPredicted RBP9.07□□□□□ -0.96
VPS36-201ENST00000378060 POC1B-GALNT4F8VUJ3 575 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 RFX5P48382 616 aaPredicted RBP9.07□□□□□ -0.96
VPS36-201ENST00000378060 MRPS9P82933 396 aaKnown RBP9.07□□□□□ -0.96
VPS36-201ENST00000378060 KRT81Q14533 505 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 RABL6Q3YEC7 729 aaPredicted RBP9.07□□□□□ -0.96
VPS36-201ENST00000378060 SEPT14Q6ZU15 432 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.07□□□□□ -0.96
VPS36-201ENST00000378060 CDKL2Q92772 493 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 VIPAS39Q9H9C1 493 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 VCX3AQ9NNX9 186 aa9.07□□□□□ -0.96
VPS36-201ENST00000378060 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.07□□□□□ -0.96
VPS36-201ENST00000378060 PNMA6FA0A0J9YX94 578 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 TTC26A0AVF1 554 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 GRID2IPA4D2P6 1211 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 BBOX1O75936 387 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 ALAS1P13196 640 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 FLAD1Q8NFF5 587 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 CELF1Q92879 486 aaKnown RBP9.06□□□□□ -0.96
VPS36-201ENST00000378060 ATP6V0A1Q93050 837 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 TRIM6Q9C030 488 aaPredicted RBP9.06□□□□□ -0.96
VPS36-201ENST00000378060 BSDC1Q9NW68 430 aaPredicted RBP9.06□□□□□ -0.96
VPS36-201ENST00000378060 PTPN22Q9Y2R2 807 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 MXI1P50539 228 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 PDCLQ13371 301 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 KCNB1Q14721 858 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 HSP90AA5PQ58FG0 334 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 ARHGEF16Q5VV41 709 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 GUF1Q8N442 669 aaKnown RBP9.06□□□□□ -0.96
VPS36-201ENST00000378060 DHX36Q9H2U1 1008 aaKnown RBP9.06□□□□□ -0.96
VPS36-201ENST00000378060 HAUS2Q9NVX0 235 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 TUBE1Q9UJT0 475 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 HNRNPDLO14979 420 aaKnown RBP9.06□□□□□ -0.96
VPS36-201ENST00000378060 TEX33O43247 280 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 RASIP1Q5U651 963 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 ZCCHC17Q9NP64 241 aaKnown RBP9.06□□□□□ -0.96
VPS36-201ENST00000378060 HESX1Q9UBX0 185 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 PLAAQ9Y263 795 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 USP17L8P0C7I0 530 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 TMEM191BP0C7N4 346 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 CDC27P30260 824 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 GGCXP38435 758 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 PSMD6Q15008 389 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 E2F5Q15329 346 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 GLG1Q92896 1179 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 COA7Q96BR5 231 aa9.06□□□□□ -0.96
VPS36-201ENST00000378060 SYNGAP1Q96PV0 1343 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms