RNA–Protein interactions for RNA: ENST00000376048.9

PRDM2-204, Transcript of PR/SET domain 2, humanhuman

TSL 2 BASIC

Gene PRDM2, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-204ENST00000376048 NFS1Q9Y697 457 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 DDX60LQ5H9U9 1706 aaKnown RBP13.05□□□□□ -0.32
PRDM2-204ENST00000376048 ROBO3Q96MS0 1386 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 HMGB1P1B2RPK0 211 aaPredicted RBP13.05□□□□□ -0.32
PRDM2-204ENST00000376048 E9PMD0 336 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 DNM1LO00429 736 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 SART1O43290 800 aaKnown RBP13.05□□□□□ -0.32
PRDM2-204ENST00000376048 SLC9A1P19634 815 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 TNNI2P48788 182 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 WHAMMQ8TF30 809 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 UBLCP1Q8WVY7 318 aaPredicted RBP13.05□□□□□ -0.32
PRDM2-204ENST00000376048 ZKSCAN4Q969J2 545 aaPredicted RBP13.05□□□□□ -0.32
PRDM2-204ENST00000376048 TSG101Q99816 390 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 VCPKMTQ9H867 229 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 SEC63Q9UGP8 760 aaKnown RBP13.05□□□□□ -0.32
PRDM2-204ENST00000376048 FBXL5Q9UKA1 691 aa13.05□□□□□ -0.32
PRDM2-204ENST00000376048 NHSQ6T4R5 1651 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 DAPK3O43293 454 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 CCDC172P0C7W6 258 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 RPS6KA1Q15418 735 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 ODF2Q5BJF6 829 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 C6orf89Q6UWU4 347 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 ZNF571Q7Z3V5 609 aaPredicted RBP13.04□□□□□ -0.32
PRDM2-204ENST00000376048 BANK1Q8NDB2 785 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 SPZ1Q9BXG8 430 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 TRIM31Q9BZY9 425 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 ZC3H12CQ9C0D7 883 aaKnown RBP13.04□□□□□ -0.32
PRDM2-204ENST00000376048 ZHX3Q9H4I2 956 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 KLC4Q9NSK0 619 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 MTMR4Q9NYA4 1195 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 RNF14Q9UBS8 474 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 SLC12A6Q9UHW9 1150 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 TMEM59LQ9UK28 342 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 CEP83Q9Y592 693 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRDM2-204ENST00000376048 GCOM1H8Y6P7 765 aaPredicted RBP13.04□□□□□ -0.32
PRDM2-204ENST00000376048 FGFR1OPO95684 399 aaKnown RBP13.04□□□□□ -0.32
PRDM2-204ENST00000376048 MMP10P09238 476 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 MYZAPP0CAP1 466 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 MYBP10242 640 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 RBM5P52756 815 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRDM2-204ENST00000376048 FAM26FQ5R3K3 315 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 SLC30A10Q6XR72 485 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 MDM1Q8TC05 714 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 ISCUQ9H1K1 167 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 SLC40A1Q9NP59 571 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 PANK4Q9NVE7 773 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 STK17AQ9UEE5 414 aa13.04□□□□□ -0.32
PRDM2-204ENST00000376048 TRPC5Q9UL62 973 aaPredicted RBP13.04□□□□□ -0.32
PRDM2-204ENST00000376048 NOVA2Q9UNW9 492 aaKnown RBP13.04□□□□□ -0.32
PRDM2-204ENST00000376048 SCAF8Q9UPN6 1271 aaKnown RBP13.04□□□□□ -0.32
PRDM2-204ENST00000376048 THSD7AQ9UPZ6 1657 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 GOLGA6L10A6NI86 522 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 A6NNZ2 444 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 PHF20L1A8MW92 1017 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 TMCO5BA8MYB1 307 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP17L10C9JJH3 530 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 BBOX1O75936 387 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 KIF4AO95239 1232 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 COPB2P35606 906 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP8P40818 1118 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 TNNC1P63316 161 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 TUBB8Q3ZCM7 444 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 EMC10Q5UCC4 262 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 KRT79Q5XKE5 535 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 CDC42EP5Q6NZY7 148 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 METTL13Q8N6R0 699 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 DPH5Q9H2P9 285 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 PLCB1Q9NQ66 1216 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 ADAMTSL1Q8N6G6 1762 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP17L15C9J2P7 530 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP17L13C9JLJ4 530 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP17L11C9JVI0 530 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP17L18D6R9N7 530 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP17L22D6RA61 530 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP17L17D6RBQ6 530 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP17L19D6RCP7 530 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP17L20D6RJB6 530 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 OPLAHO14841 1288 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP17L24Q0WX57 530 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 USP17L6PQ6QN14 398 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 KRT27Q7Z3Y8 459 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 ADAT2Q7Z6V5 191 aaKnown RBP13.03□□□□□ -0.32
PRDM2-204ENST00000376048 TRIM59Q8IWR1 403 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 TAF4BQ92750 862 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 BCAS3Q9H6U6 928 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 DNAJC18Q9H819 358 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 HAUS2Q9NVX0 235 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 NOC2LQ9Y3T9 749 aaKnown RBP13.03□□□□□ -0.32
PRDM2-204ENST00000376048 NR2E1Q9Y466 385 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 ABCB11O95342 1321 aa13.03□□□□□ -0.32
PRDM2-204ENST00000376048 ATXN2Q99700 1313 aaKnown RBP13.03□□□□□ -0.32
PRDM2-204ENST00000376048 TESPA1A2RU30 521 aaPredicted RBP13.02□□□□□ -0.32
PRDM2-204ENST00000376048 GMNCA6NCL1 334 aa13.02□□□□□ -0.32
PRDM2-204ENST00000376048 G3V3G9 751 aa13.02□□□□□ -0.32
PRDM2-204ENST00000376048 TTI1O43156 1089 aa13.02□□□□□ -0.32
PRDM2-204ENST00000376048 RASSF9O75901 435 aa13.02□□□□□ -0.32
PRDM2-204ENST00000376048 CHRNA5P30532 468 aa13.02□□□□□ -0.32
PRDM2-204ENST00000376048 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.32
PRDM2-204ENST00000376048 CASP5P51878 434 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms