RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 RMDN3Q96TC7 470 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 POP1Q99575 1024 aaKnown RBP11.86□□□□□ -0.51
CXCL12-203ENST00000374429 STK17AQ9UEE5 414 aa11.86□□□□□ -0.51
CXCL12-203ENST00000374429 EFCAB8A8MWE9 144 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 AKAP3O75969 853 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 COPB2P35606 906 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 KCNB1Q14721 858 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 LONRF2Q1L5Z9 754 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 MOB2Q70IA6 237 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 SRGAP1Q7Z6B7 1085 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 DNAJC19Q96DA6 116 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 AP1M1Q9BXS5 423 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 HAUS4Q9H6D7 363 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 GCNT4Q9P109 453 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 ZNRF3Q9ULT6 936 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 CAPN11Q9UMQ6 739 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 ZSCAN5CA6NGD5 496 aaPredicted RBP11.85□□□□□ -0.51
CXCL12-203ENST00000374429 TULP2O00295 520 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 TACC1O75410 805 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 SASH3O75995 380 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 EXOC3L4Q17RC7 722 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 HS2ST1Q7LGA3 356 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 CDR2LQ86X02 465 aaPredicted RBP11.85□□□□□ -0.51
CXCL12-203ENST00000374429 DCAF4Q8WV16 495 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 NCAPGQ9BPX3 1015 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 FAM107BQ9H098 131 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 FHOD1Q9Y613 1164 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 CHD4Q14839 1912 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 C4BP0C0L5 1744 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 ZNF263O14978 683 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 NF2P35240 595 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 FXR2P51116 673 aaKnown RBP eCLIP11.85□□□□□ -0.51
CXCL12-203ENST00000374429 SMC1AQ14683 1233 aaKnown RBP11.85□□□□□ -0.51
CXCL12-203ENST00000374429 SLC9C1Q4G0N8 1177 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 C15orf52Q6ZUT6 534 aaKnown RBP11.85□□□□□ -0.51
CXCL12-203ENST00000374429 SLFN12Q8IYM2 578 aa11.85□□□□□ -0.51
CXCL12-203ENST00000374429 UHMK1Q8TAS1 419 aaKnown RBP11.85□□□□□ -0.51
CXCL12-203ENST00000374429 RPAP3Q9H6T3 665 aaPredicted RBP11.85□□□□□ -0.51
CXCL12-203ENST00000374429 WRAP73Q9P2S5 460 aaPredicted RBP11.85□□□□□ -0.51
CXCL12-203ENST00000374429 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 RASSF10A6NK89 507 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 SMIM23A6NLE4 172 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 ARHGAP25P42331 645 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 RPS6P62753 249 aaKnown RBP11.84□□□□□ -0.51
CXCL12-203ENST00000374429 BAATQ14032 418 aaPredicted RBP11.84□□□□□ -0.51
CXCL12-203ENST00000374429 CEP55Q53EZ4 464 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 GOLGA6L1Q8N7Z2 621 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 PICK1Q9NRD5 415 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 HACL1Q9UJ83 578 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 SALL4Q9UJQ4 1053 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 DDX41Q9UJV9 622 aaKnown RBP11.84□□□□□ -0.51
CXCL12-203ENST00000374429 A0A087X0T9 212 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 KCNK3O14649 394 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 NR3C1P04150 777 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 FAM228BP0C875 321 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 EPB41P11171 864 aaKnown RBP11.84□□□□□ -0.51
CXCL12-203ENST00000374429 GIT2Q14161 759 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 ASIC2Q16515 512 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 FAM182AQ5T1J6 154 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 GUF1Q8N442 669 aaKnown RBP11.84□□□□□ -0.51
CXCL12-203ENST00000374429 TCHPQ9BT92 498 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 UNC45AQ9H3U1 944 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 KCNH7Q9NS40 1196 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 RIPK3Q9Y572 518 aa11.84□□□□□ -0.51
CXCL12-203ENST00000374429 CEP104O60308 925 aa11.83□□□□□ -0.51
CXCL12-203ENST00000374429 ATP9AO75110 1047 aa11.83□□□□□ -0.51
CXCL12-203ENST00000374429 CCDC172P0C7W6 258 aa11.83□□□□□ -0.51
CXCL12-203ENST00000374429 PBX1P40424 430 aa11.83□□□□□ -0.51
CXCL12-203ENST00000374429 OSTNP61366 133 aa11.83□□□□□ -0.51
CXCL12-203ENST00000374429 EAPPQ56P03 285 aaPredicted RBP11.83□□□□□ -0.51
CXCL12-203ENST00000374429 ICE2Q659A1 982 aa11.83□□□□□ -0.51
CXCL12-203ENST00000374429 KCTD16Q68DU8 428 aa11.83□□□□□ -0.51
CXCL12-203ENST00000374429 CENPPQ6IPU0 288 aa11.83□□□□□ -0.51
CXCL12-203ENST00000374429 PPM1KQ8N3J5 372 aa11.83□□□□□ -0.51
CXCL12-203ENST00000374429 NAA15Q9BXJ9 866 aaKnown RBP11.83□□□□□ -0.51
CXCL12-203ENST00000374429 L2HGDHQ9H9P8 463 aa11.83□□□□□ -0.51
CXCL12-203ENST00000374429 PALMO75781 387 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 SPATA31C1P0DKV0 1188 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 SNHG28P0DPA3 235 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 PDIA5Q14554 519 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
CXCL12-203ENST00000374429 SUPT20HQ8NEM7 779 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 COL20A1Q9P218 1284 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 PDE2AO00408 941 aaPredicted RBP11.83□□□□□ -0.52
CXCL12-203ENST00000374429 OPLAHO14841 1288 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 CSDE1O75534 798 aaKnown RBP11.83□□□□□ -0.52
CXCL12-203ENST00000374429 CAP2P40123 477 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 MTMR1Q13613 665 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 PPP4R3AQ6IN85 833 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 RINT1Q6NUQ1 792 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 GLYCTKQ8IVS8 523 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 FAM186BQ8IYM0 893 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 CEP112Q8N8E3 955 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 ZNF507Q8TCN5 953 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 FAM151AQ8WW52 585 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 CUEDC2Q9H467 287 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 VCPKMTQ9H867 229 aa11.83□□□□□ -0.52
CXCL12-203ENST00000374429 MRPL11Q9Y3B7 192 aaKnown RBP11.83□□□□□ -0.52
CXCL12-203ENST00000374429 IGKV6D-41A0A0C4DH26 115 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms