RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 LMBR1Q8WVP7 490 aa18.27■□□□□ 0.51
SSH1-201ENST00000326470 P3H4Q92791 437 aa18.27■□□□□ 0.51
SSH1-201ENST00000326470 MAGOHBQ96A72 148 aaKnown RBP18.27■□□□□ 0.51
SSH1-201ENST00000326470 SUCLA2Q9P2R7 463 aaPredicted RBP18.27■□□□□ 0.51
SSH1-201ENST00000326470 HDAC9Q9UKV0 1011 aa18.27■□□□□ 0.51
SSH1-201ENST00000326470 NENFQ9UMX5 172 aa18.27■□□□□ 0.51
SSH1-201ENST00000326470 E9PMD0 336 aa18.26■□□□□ 0.51
SSH1-201ENST00000326470 C21orf2O43822 256 aa18.26■□□□□ 0.51
SSH1-201ENST00000326470 SLC9A1P19634 815 aa18.26■□□□□ 0.51
SSH1-201ENST00000326470 PPARDQ03181 441 aa18.26■□□□□ 0.51
SSH1-201ENST00000326470 GKAP1Q5VSY0 366 aaPredicted RBP18.26■□□□□ 0.51
SSH1-201ENST00000326470 TBC1D9BQ66K14 1250 aa18.26■□□□□ 0.51
SSH1-201ENST00000326470 CCDC50Q8IVM0 306 aa18.26■□□□□ 0.51
SSH1-201ENST00000326470 SGSM3Q96HU1 749 aa18.26■□□□□ 0.51
SSH1-201ENST00000326470 MCM8Q9UJA3 840 aa18.26■□□□□ 0.51
SSH1-201ENST00000326470 PCDHA12Q9UN75 941 aa18.26■□□□□ 0.51
SSH1-201ENST00000326470 EP400Q96L91 3159 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 A0A0A6YYK5 440 aaPredicted RBP18.25■□□□□ 0.51
SSH1-201ENST00000326470 DCDC2CA8MYV0 355 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 F8VZ95 297 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 PLA2G4BP0C869 781 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 NR2F2P24468 414 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 SNCBQ16143 134 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 PTPROQ16827 1216 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 TAX1BP1Q86VP1 789 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 RTFDC1Q9BY42 306 aaPredicted RBP18.25■□□□□ 0.51
SSH1-201ENST00000326470 FAM114A2Q9NRY5 505 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 FRMPD2Q68DX3 1309 aaPredicted RBP18.25■□□□□ 0.51
SSH1-201ENST00000326470 TTI1O43156 1089 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 SCTRP47872 440 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 DHX9Q08211 1270 aaKnown RBP18.25■□□□□ 0.51
SSH1-201ENST00000326470 KRT71Q3SY84 523 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 FRMD5Q7Z6J6 570 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 GPBP1Q86WP2 473 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 DNAAF5Q86Y56 855 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 SYCE1Q8N0S2 351 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 RBM46Q8TBY0 533 aaKnown RBP18.25■□□□□ 0.51
SSH1-201ENST00000326470 MAGEC3Q8TD91 643 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 GJA10Q969M2 543 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 C8orf37Q96NL8 207 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 CNOT10Q9H9A5 744 aaKnown RBP18.25■□□□□ 0.51
SSH1-201ENST00000326470 SWAP70Q9UH65 585 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 KIAA1024Q9UPX6 916 aa18.25■□□□□ 0.51
SSH1-201ENST00000326470 NPHP3-ACAD11A0A0J9YXS1 232 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 MARCH6O60337 910 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 CYP11B2P19099 503 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 PON1P27169 355 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 CACNB1Q02641 598 aaPredicted RBP18.24■□□□□ 0.51
SSH1-201ENST00000326470 EXOC3L4Q17RC7 722 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 SPDYCQ5MJ68 293 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 PPP1R18Q6NYC8 613 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 GIMAP7Q8NHV1 300 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 PSMD1Q99460 953 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 NYXQ9GZU5 481 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 INTUQ9ULD6 942 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 UTP11Q9Y3A2 253 aaKnown RBP18.24■□□□□ 0.51
SSH1-201ENST00000326470 FRMD3A2A2Y4 597 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 BACH1O14867 736 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 AFPP02771 609 aaKnown RBP18.24■□□□□ 0.51
SSH1-201ENST00000326470 H2AFZP0C0S5 128 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 DRD4P21917 467 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 CLK2P49760 499 aaKnown RBP18.24■□□□□ 0.51
SSH1-201ENST00000326470 NPEPPSP55786 919 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 EIF3BP55884 814 aaKnown RBP18.24■□□□□ 0.51
SSH1-201ENST00000326470 POU5F1Q01860 360 aaKnown RBP18.24■□□□□ 0.51
SSH1-201ENST00000326470 ASPRV1Q53RT3 343 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 H2AFVQ71UI9 128 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 CPLX4Q7Z7G2 160 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 NT5DC3Q86UY8 548 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 TLCD1Q96CP7 247 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 HAUS2Q9NVX0 235 aa18.24■□□□□ 0.51
SSH1-201ENST00000326470 ARMCX3Q9UH62 379 aaPredicted RBP18.24■□□□□ 0.51
SSH1-201ENST00000326470 DDX60LQ5H9U9 1706 aaKnown RBP18.24■□□□□ 0.51
SSH1-201ENST00000326470 GCFC2P16383 781 aaKnown RBP18.23■□□□□ 0.51
SSH1-201ENST00000326470 XRCC4Q13426 336 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 UBE2SQ16763 222 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 SPATA31A6Q5VVP1 1343 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 CCT6BQ92526 530 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 CENPTQ96BT3 561 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 HES6Q96HZ4 224 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 KDM4CQ9H3R0 1056 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 PHF20L1A8MW92 1017 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 RGL2O15211 777 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 PPFIA2O75334 1257 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 GHRP10912 638 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 BTDP43251 543 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
SSH1-201ENST00000326470 VPS36Q86VN1 386 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 FAM228AQ86W67 206 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 TXLNGYQ9BZA5 131 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 CELF4Q9BZC1 486 aaKnown RBP18.23■□□□□ 0.51
SSH1-201ENST00000326470 TTC7AQ9ULT0 858 aaPredicted RBP18.23■□□□□ 0.51
SSH1-201ENST00000326470 TRAF3IP3Q9Y228 551 aa18.23■□□□□ 0.51
SSH1-201ENST00000326470 PITPNM2Q9BZ72 1349 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 ERMARDQ5T6L9 678 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 DAAM2Q86T65 1068 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 POTEB3A0JP26 581 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 POTECB2RU33 542 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 SLC26A4O43511 780 aa18.22■□□□□ 0.51
SSH1-201ENST00000326470 DNAJC8O75937 253 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms