RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 KANSL2Q9H9L4 492 aa12.19□□□□□ -0.46
INO80-205ENST00000558357 NXF1Q9UBU9 619 aaKnown RBP12.19□□□□□ -0.46
INO80-205ENST00000558357 WDR91A4D1P6 747 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 WDR64B1ANS9 1081 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 HNRNPCL2B2RXH8 293 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 HNRNPCL1O60812 293 aaKnown RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 CLCN6P51797 869 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 HSPA2P54652 639 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 TMED1Q13445 227 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 ARL13BQ3SXY8 428 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 KCTD1Q719H9 257 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 PRPF38AQ8NAV1 312 aaKnown RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 VPS39Q96JC1 886 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 AP5M1Q9H0R1 490 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 OSBPL3Q9H4L5 887 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 SAMSN1Q9NSI8 373 aaKnown RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 GINM1Q9NU53 330 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 SPTLC3Q9NUV7 552 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 BCS1LQ9Y276 419 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 SRPRBQ9Y5M8 271 aaKnown RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 CCDC188H7C350 402 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 M0R2C6 588 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 GRAMD1BQ3KR37 738 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 GRAMD1CQ8IYS0 662 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 DBNLQ9UJU6 430 aaKnown RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 SPAG7O75391 227 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 KRT37O76014 449 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 PMLP29590 882 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 EPHB1P54762 984 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 YWHAHQ04917 246 aaPredicted RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 TAF1BQ53T94 588 aaPredicted RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 LCA5Q86VQ0 697 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 SPICE1Q8N0Z3 855 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 SYT2Q8N9I0 419 aaPredicted RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 PIGSQ96S52 555 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 NDST4Q9H3R1 872 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 OLA1Q9NTK5 396 aaKnown RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 G3BP2Q9UN86 482 aaKnown RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 MYOM2P54296 1465 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 PODXLO00592 558 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 ADORA1P30542 326 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 LRRC23Q53EV4 343 aaPredicted RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 ZBTB18Q99592 522 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 LRFN2Q9ULH4 789 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 PRPF3O43395 683 aaKnown RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 HSPA4LO95757 839 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 GLE1Q53GS7 698 aaKnown RBP12.18□□□□□ -0.46
INO80-205ENST00000558357 FAM96AQ9H5X1 160 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 SUN2Q9UH99 717 aa12.18□□□□□ -0.46
INO80-205ENST00000558357 TADA3O75528 432 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 PLA2G4BP0C869 781 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 ZSCAN20P17040 1043 aaPredicted RBP12.17□□□□□ -0.46
INO80-205ENST00000558357 OSBPP22059 807 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 NOP14P78316 857 aaKnown RBP12.17□□□□□ -0.46
INO80-205ENST00000558357 NUGGCQ68CJ6 796 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 AP1M1Q9BXS5 423 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 NOP53Q9NZM5 478 aaKnown RBP12.17□□□□□ -0.46
INO80-205ENST00000558357 MEIS1O00470 390 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 SPARCL1Q14515 664 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 WDR75Q8IWA0 830 aaKnown RBP12.17□□□□□ -0.46
INO80-205ENST00000558357 ABCB6Q9NP58 842 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 USP21Q9UK80 565 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 INTUQ9ULD6 942 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 PLEKHG3A1L390 1219 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 SH2B2O14492 632 aaPredicted RBP12.17□□□□□ -0.46
INO80-205ENST00000558357 BMP3P12645 472 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 IFNAR1P17181 557 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 PAMP19021 973 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 ANXA13P27216 316 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 ADD2P35612 726 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 RNF139Q8WU17 664 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 PTPRTO14522 1441 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 PSAPP07602 524 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 IFNA8P32881 189 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 MDM2Q00987 491 aaPredicted RBP12.17□□□□□ -0.46
INO80-205ENST00000558357 LLGL1Q15334 1064 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 KRT39Q6A163 491 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 RNF217Q8TC41 542 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 PAGE5Q96GU1 130 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 HEXIM2Q96MH2 286 aaKnown RBP12.17□□□□□ -0.46
INO80-205ENST00000558357 TRIM55Q9BYV6 548 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 PITPNM3Q9BZ71 974 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 TEKT2Q9UIF3 430 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 SLC8A2Q9UPR5 921 aa12.17□□□□□ -0.46
INO80-205ENST00000558357 TMEM247A6NEH6 219 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 TJP3O95049 919 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 CD58P19256 250 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 BAG6P46379 1132 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 TBC1D10BQ4KMP7 808 aaPredicted RBP12.16□□□□□ -0.46
INO80-205ENST00000558357 TMC4Q7Z404 712 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 CDC26Q8NHZ8 85 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 N4BP2L2Q92802 583 aaPredicted RBP12.16□□□□□ -0.46
INO80-205ENST00000558357 KLC2Q9H0B6 622 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 TMEM60Q9H2L4 133 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 MAST1Q9Y2H9 1570 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 ATP5HO75947 161 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 PLCG1P19174 1290 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 NFKBIAP25963 317 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 DDIT3P35638 169 aa12.16□□□□□ -0.46
INO80-205ENST00000558357 STAT2P52630 851 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms