RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 CARS2Q9HA77 564 aaKnown RBP7.38□□□□□ -1.23
VPS29-210ENST00000552130 RSAD1Q9HA92 442 aa7.38□□□□□ -1.23
VPS29-210ENST00000552130 CD248Q9HCU0 757 aa7.38□□□□□ -1.23
VPS29-210ENST00000552130 NMRK2Q9NPI5 230 aa7.38□□□□□ -1.23
VPS29-210ENST00000552130 TBC1D22BQ9NU19 505 aa7.38□□□□□ -1.23
VPS29-210ENST00000552130 ODF2LQ9ULJ1 636 aa7.38□□□□□ -1.23
VPS29-210ENST00000552130 SYNPO2Q9UMS6 1093 aa7.38□□□□□ -1.23
VPS29-210ENST00000552130 DNM3Q9UQ16 869 aa7.38□□□□□ -1.23
VPS29-210ENST00000552130 TMX2Q9Y320 296 aa7.38□□□□□ -1.23
VPS29-210ENST00000552130 A0A1W2PQU0 124 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 GNAT3A8MTJ3 354 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 M0R3H8 397 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 HMMRO75330 724 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 VAMP4O75379 141 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 PAGE1O75459 146 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 ATE1O95260 518 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 CPP00450 1065 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 ASLP04424 464 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 JMJD7P0C870 316 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 VCAM1P19320 739 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 RAD52P43351 418 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 MPP1Q00013 466 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 GJC2Q5T442 439 aaPredicted RBP7.37□□□□□ -1.23
VPS29-210ENST00000552130 BRAPQ7Z569 592 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 CMTR2Q8IYT2 770 aaKnown RBP7.37□□□□□ -1.23
VPS29-210ENST00000552130 NSUN6Q8TEA1 469 aaKnown RBP7.37□□□□□ -1.23
VPS29-210ENST00000552130 PDGFDQ9GZP0 370 aaPredicted RBP7.37□□□□□ -1.23
VPS29-210ENST00000552130 PRKRIP1Q9H875 184 aaPredicted RBP7.37□□□□□ -1.23
VPS29-210ENST00000552130 CD320Q9NPF0 282 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 PRDM5Q9NQX1 630 aaPredicted RBP7.37□□□□□ -1.23
VPS29-210ENST00000552130 PDP2Q9P2J9 529 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 ARHGAP28Q9P2N2 729 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 CEP131Q9UPN4 1083 aa7.37□□□□□ -1.23
VPS29-210ENST00000552130 CNTNAP4Q9C0A0 1308 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 M0R2C6 588 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 NCAM2O15394 837 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 BAIAP3O94812 1187 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 IL33O95760 270 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 PYGLP06737 847 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 GLULP15104 373 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 HOXC13P31276 330 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 PIK3CAP42336 1068 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 ROR1Q01973 937 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 HSP90AA2PQ14568 343 aaPredicted RBP7.36□□□□□ -1.23
VPS29-210ENST00000552130 LRRFIP1Q32MZ4 808 aaKnown RBP7.36□□□□□ -1.23
VPS29-210ENST00000552130 NBPF8Q3BBV2 869 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 CFAP100Q494V2 611 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 KIAA1211LQ6NV74 962 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 TLDC1Q6P9B6 456 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 MPZL3Q6UWV2 235 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 SLFN12Q8IYM2 578 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 SLC7A14Q8TBB6 771 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 ACSBG1Q96GR2 724 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 HSPA12BQ96MM6 686 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 AARSD1Q9BTE6 412 aaKnown RBP7.36□□□□□ -1.23
VPS29-210ENST00000552130 WDR12Q9GZL7 423 aaKnown RBP7.36□□□□□ -1.23
VPS29-210ENST00000552130 MYLK2Q9H1R3 596 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 CXorf56Q9H5V9 222 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 PHAXQ9H814 394 aaKnown RBP7.36□□□□□ -1.23
VPS29-210ENST00000552130 AGO4Q9HCK5 861 aaKnown RBP7.36□□□□□ -1.23
VPS29-210ENST00000552130 ATP13A1Q9HD20 1204 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 NDOR1Q9UHB4 597 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 GJD2Q9UKL4 321 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 PCDHB10Q9UN67 800 aa7.36□□□□□ -1.23
VPS29-210ENST00000552130 MAGED1Q9Y5V3 778 aaPredicted RBP7.36□□□□□ -1.23
VPS29-210ENST00000552130 LTBP3Q9NS15 1303 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 TRIM75PA6NK02 468 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 MEIS3P2A8K0S8 358 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 PRR33A8MZF0 331 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 B8ZZF3 427 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 TOR1BO14657 336 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 TPP1O14773 563 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 CTNND1O60716 968 aaKnown RBP7.35□□□□□ -1.23
VPS29-210ENST00000552130 GFPT2O94808 682 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 SLITRK5O94991 958 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 CD4P01730 458 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 IGHDP01880 384 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 MED14OSP0DP75 135 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 FLT3P36888 993 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 UBA7P41226 1012 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 SCNN1BP51168 640 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 ERVK-21P61565 698 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 PFKPQ01813 784 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 PPFIA1Q13136 1202 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 ZYXQ15942 572 aaKnown RBP7.35□□□□□ -1.23
VPS29-210ENST00000552130 PRR16Q569H4 304 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 SPATA1Q5VX52 437 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 KIAA1614Q5VZ46 1190 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 LMBRD2Q68DH5 695 aaPredicted RBP7.35□□□□□ -1.23
VPS29-210ENST00000552130 RETSATQ6NUM9 610 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 B3GNT9Q6UX72 402 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 C4orf50Q6ZRC1 276 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 SRGAP1Q7Z6B7 1085 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 RPAINQ86UA6 219 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 TAB3Q8N5C8 712 aaPredicted RBP7.35□□□□□ -1.23
VPS29-210ENST00000552130 MYCT1Q8N699 235 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 DEPTORQ8TB45 409 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 GRIN3AQ8TCU5 1115 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 UNC45AQ9H3U1 944 aa7.35□□□□□ -1.23
VPS29-210ENST00000552130 CBX8Q9HC52 389 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms