RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 ABCB6Q9NP58 842 aa17.55■□□□□ 0.4
ATP2C1-224ENST00000533801 KCNMB3Q9NPA1 279 aa17.55■□□□□ 0.4
ATP2C1-224ENST00000533801 ARMCX3Q9UH62 379 aaPredicted RBP17.55■□□□□ 0.4
ATP2C1-224ENST00000533801 OPLAHO14841 1288 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 POLD1P28340 1107 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 CXCL9Q07325 125 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 KLHL30Q0D2K2 578 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 COG2Q14746 738 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 UTP14CQ5TAP6 766 aaKnown RBP17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 GLT8D2Q9H1C3 349 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 ENTPD3O75355 529 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 PPP1R2P41236 205 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 ZNF831Q5JPB2 1677 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 NFIBO00712 420 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 SPATA31C1P0DKV0 1188 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 INPP5BP32019 993 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 USP8P40818 1118 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 SLC7A5Q01650 507 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 GIT2Q14161 759 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 ETNPPLQ8TBG4 499 aa17.54■□□□□ 0.4
ATP2C1-224ENST00000533801 TACC1O75410 805 aa17.53■□□□□ 0.4
ATP2C1-224ENST00000533801 OAS2P29728 719 aaKnown RBP17.53■□□□□ 0.4
ATP2C1-224ENST00000533801 CHURC1Q8WUH1 139 aa17.53■□□□□ 0.4
ATP2C1-224ENST00000533801 ANKRD31Q8N7Z5 1873 aa17.53■□□□□ 0.4
ATP2C1-224ENST00000533801 ODR4Q5SWX8 454 aa17.53■□□□□ 0.4
ATP2C1-224ENST00000533801 MTMR8Q96EF0 704 aa17.53■□□□□ 0.4
ATP2C1-224ENST00000533801 TESPA1A2RU30 521 aaPredicted RBP17.53■□□□□ 0.4
ATP2C1-224ENST00000533801 FOSP01100 380 aaPredicted RBP17.53■□□□□ 0.4
ATP2C1-224ENST00000533801 ERGIC2Q96RQ1 377 aa17.53■□□□□ 0.4
ATP2C1-224ENST00000533801 SIK3Q9Y2K2 1263 aa17.53■□□□□ 0.4
ATP2C1-224ENST00000533801 TRIM49P0CI25 452 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 TRIM49CP0CI26 452 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 XRCC5P13010 732 aaKnown RBP17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 SLC12A3P55017 1021 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 KCNMA1Q12791 1236 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 SLC9C1Q4G0N8 1177 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 SMAP1Q8IYB5 467 aaPredicted RBP17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 FAM151AQ8WW52 585 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 ELMO3Q96BJ8 720 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 GMCL1Q96IK5 515 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 TRERF1Q96PN7 1200 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 MYH10P35580 1976 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 WNT10BO00744 389 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 SREBF1P36956 1147 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 HDLBPQ00341 1268 aaKnown RBP17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 ARHGAP44Q17R89 818 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 PROCA1Q8NCQ7 364 aaPredicted RBP17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 NAP1L4Q99733 375 aaKnown RBP17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 PACSIN1Q9BY11 444 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 ANKZF1Q9H8Y5 726 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 PDE11AQ9HCR9 933 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 MYO3BQ8WXR4 1341 aa17.52■□□□□ 0.4
ATP2C1-224ENST00000533801 PLA2G4AP47712 749 aa17.52■□□□□ 0.39
ATP2C1-224ENST00000533801 VAV2P52735 878 aa17.52■□□□□ 0.39
ATP2C1-224ENST00000533801 PSMD2Q13200 908 aa17.52■□□□□ 0.39
ATP2C1-224ENST00000533801 ORC2Q13416 577 aaPredicted RBP17.52■□□□□ 0.39
ATP2C1-224ENST00000533801 SMC1AQ14683 1233 aaKnown RBP17.52■□□□□ 0.39
ATP2C1-224ENST00000533801 RSRC2Q7L4I2 434 aaKnown RBP17.52■□□□□ 0.39
ATP2C1-224ENST00000533801 COG1Q8WTW3 980 aa17.52■□□□□ 0.39
ATP2C1-224ENST00000533801 C7orf43Q8WVR3 580 aa17.52■□□□□ 0.39
ATP2C1-224ENST00000533801 LENG9Q96B70 501 aa17.52■□□□□ 0.39
ATP2C1-224ENST00000533801 TTYH3Q9C0H2 523 aa17.52■□□□□ 0.39
ATP2C1-224ENST00000533801 ARHGEF35A5YM69 484 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 KIF20AO95235 890 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 RPA1P27694 616 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 FAM178BQ8IXR5 827 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 MS4A14Q96JA4 679 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 HERC5Q9UII4 1024 aaKnown RBP17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 TISP43B9A030 160 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 KIAA0753Q2KHM9 967 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 RETREG2Q8NC44 543 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 GMCL1P1Q8NEA9 526 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 IL31RAQ8NI17 732 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 WDR11Q9BZH6 1224 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 TBC1D8O95759 1140 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 KNOP1Q1ED39 458 aaKnown RBP17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 ALS2CR12Q96Q35 445 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 VCPKMTQ9H867 229 aa17.51■□□□□ 0.39
ATP2C1-224ENST00000533801 ERLIN1O75477 346 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 AKAP3O75969 853 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 ASIC2Q16515 512 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 RTKN2Q8IZC4 609 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 PLAGL2Q9UPG8 496 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 TMX2Q9Y320 296 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 MRPL11Q9Y3B7 192 aaKnown RBP17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 EIF3CLB5ME19 914 aaKnown RBP17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 IPO5O00410 1097 aaKnown RBP17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 NR3C1P04150 777 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 CEP55Q53EZ4 464 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 PDXDC1Q6P996 788 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 EIF3CQ99613 913 aaKnown RBP17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 LXNQ9BS40 222 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 ZNRF3Q9ULT6 936 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 N4BP1O75113 896 aaKnown RBP17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 LRRN2O75325 713 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 EPB41P11171 864 aaKnown RBP17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 EHHADHQ08426 723 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 SPP2Q13103 211 aa17.5■□□□□ 0.39
ATP2C1-224ENST00000533801 MTMR2Q13614 643 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms